Tk11414, Tk11414 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11414
Unique NameTk11414
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length521
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 29..94
e-value: 0.0034
score: 26.6
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 44..92
e-value: 7.4E-9
score: 35.6
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 28..94
score: 11.033
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLa_2coord: 111..148
e-value: 1.9E-10
score: 50.7
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 112..146
e-value: 1.0E-8
score: 35.1
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 111..147
score: 12.363
IPR002172Low-density lipoprotein (LDL) receptor class A repeatCDDcd00112LDLacoord: 112..146
e-value: 1.94491E-11
score: 56.4462
NoneNo IPR availableGENE3D4.10.400.10coord: 111..143
e-value: 5.6E-10
score: 41.1
NoneNo IPR availableGENE3D2.170.140.10coord: 26..100
e-value: 6.9E-6
score: 27.5
NoneNo IPR availableGENE3D3.20.20.370coord: 218..458
e-value: 2.4E-47
score: 163.8
NoneNo IPR availablePANTHERPTHR11177:SF142CHLD3coord: 33..519
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 33..519
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..521
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableCDDcd10974CE4_CDA_like_1coord: 187..455
e-value: 1.87833E-155
score: 441.776
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..15
score: 0.765
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.822
IPR002509NodB homology domainPFAMPF01522Polysacc_deac_1coord: 187..320
e-value: 1.1E-5
score: 25.2
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 124..146
IPR036508Chitin binding domain superfamilySUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 50..100
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 106..146
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 156..457

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold993_size72668-processed-gene-0.0-mRNA-1snap_masked-scaffold993_size72668-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11414 ID=Tk11414|Name=Tk11414|organism=Tigriopus kingsejongensis|type=polypeptide|length=521bp
MVLLAALLSSGLAWALLGGQVQAVLREKVPCIENGKFYRNPNRDQDEMWS
TKHCAKYFLCVEAEVYDFKCSTGLSFDINRQICDFKHEVDNCDITAEVTT
PKPLFNTQEPICPTGEHACSDGTCLPSDLFCDGHPDCYDGSDEGWCDIEH
DPNAAPSCDYANCTLPNCFCSVDGTLVPGGMDPADVPQMVLITFDDAIND
ENWDLYEEKLFPKSKKNPNGCPIHATFFVSHEYTNYAMVNKLWNQGHEVS
VHSITHRGPENWWDKNATIEDWFDEMVGQANIINRFGGVRMEDIRGVRVP
FLRPGWNKQFLMMKEFGFVYDASIPAPLSDPPIWPYTLDFKIPHKCISNR
KCPTRSFPGIWEMPLNQLVFEEFSCAMVDSCPPYFSEDELYNIFMTNFNR
HYNSNRAPLGLYFHTTWFKNKKNRRAFRKFLDQMVSRNDVWVVNNYEAIQ
WMQNPTPQAQMNDFQAWKTCDIPVPIEEQACNIPKVCKLFSRELRKQRYL
YTCKDCPDTYPWIKNEFGMEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR002172LDrepeatLR_classA_rpt
IPR002509NODB_dom
IPR023415LDLR_class-A_CS
IPR036508Chitin-bd_dom_sf
IPR036055LDL_receptor-like_sf
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0005515protein binding
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824catalytic activity
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