Tk11425, Tk11425 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11425
Unique NameTk11425
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length542
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 12..48
e-value: 2.3E-10
score: 40.3
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 12..48
score: 11.162
NoneNo IPR availableGENE3D3.30.70.3410coord: 147..227
e-value: 2.6E-49
score: 170.2
NoneNo IPR availableGENE3D2.170.270.10coord: 228..311
e-value: 2.6E-49
score: 170.2
coord: 62..91
e-value: 2.6E-49
score: 170.2
NoneNo IPR availableGENE3D3.30.60.180coord: 3..52
e-value: 6.5E-13
score: 50.2
NoneNo IPR availableGENE3D3.30.60.180coord: 92..146
e-value: 2.6E-49
score: 170.2
NoneNo IPR availablePANTHERPTHR12197:SF176SUBFAMILY NOT NAMEDcoord: 11..487
NoneNo IPR availablePANTHERPTHR12197SET AND MYND DOMAIN CONTAININGcoord: 11..487
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 230..308
coord: 51..95
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 9..51
IPR001214SET domainPFAMPF00856SETcoord: 60..283
e-value: 4.1E-6
score: 27.2
IPR001214SET domainPROSITEPS50280SETcoord: 49..284
score: 10.408

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold953_size76948-snap-gene-0.8-mRNA-1maker-scaffold953_size76948-snap-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11425 ID=Tk11425|Name=Tk11425|organism=Tigriopus kingsejongensis|type=polypeptide|length=542bp
MSELAEIEKISCAFCNGDANQRCTGCHVTFYCSREHQKQHWKKHKTNCCA
FKICSSSVIGRHVVATRDLRPGELVLSENPLLIAPMAYTVPICLACFKPV
DGSIRCTTCGWPMCSDLCIGSSNHVPECTLNNSRGKPIPDEVGSNSVPNP
IYEAIATLRCIYLKQSNPDVFEKLMQLEAHAEKRKLNGRVDKDQIILKMI
RRFFNISASLISDDEVLDLQGILFVNSHEVPVTPTPVLALYLNSSLIEHN
CVSNASKHFDTDGSLQIRAAVHIRKGDHIAITYSDPMWGNANRQQHLMES
KFFQCICNRCQDPLELGTNFSSLRCPSCPAQANGYLSSINPLDIHSPFSC
DHCHCEESADYVNAVIRSIGEELVQLEKGNPEACLTFIKKHSQNLHRNHF
YLMDVKLALCQLIGKNLDTVEDQSNTVMDFRTREKDLIIKQKLCMELISI
ANIISPGISRLRGVILYELQSTLAIYARKKFAAKEITLDHFKNIIQEVRR
YLIECIQIFSFESECIQEGRLASVARLKLAEVEDQLSSFDTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
IPR001214SET_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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