Tk11577, Tk11577 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11577
Unique NameTk11577
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length518
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 304..326
e-value: 0.0038
score: 26.4
coord: 331..355
e-value: 0.86
score: 18.6
coord: 191..215
e-value: 3.1
score: 16.8
coord: 276..298
e-value: 0.009
score: 25.2
coord: 164..184
e-value: 300.0
score: 0.2
coord: 248..270
e-value: 0.054
score: 22.6
coord: 361..383
e-value: 0.0027
score: 27.0
coord: 218..240
e-value: 5.6
score: 15.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 250..270
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 193..215
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 278..298
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 363..383
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 276..303
score: 10.887
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 304..331
score: 10.616
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 248..275
score: 11.822
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 331..360
score: 9.556
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 361..388
score: 12.508
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 191..219
score: 9.162
NoneNo IPR availableGENE3D3.30.160.60coord: 219..272
e-value: 1.0E-9
score: 40.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 304..326
e-value: 0.0036
score: 17.6
coord: 361..383
e-value: 0.0091
score: 16.3
NoneNo IPR availableGENE3D3.30.160.60coord: 273..296
e-value: 4.1E-7
score: 31.8
NoneNo IPR availableGENE3D3.30.160.60coord: 297..327
e-value: 8.8E-7
score: 30.8
NoneNo IPR availableGENE3D3.30.710.10coord: 1..103
e-value: 1.1E-9
score: 40.4
NoneNo IPR availableGENE3D3.30.160.60coord: 328..414
e-value: 6.6E-11
score: 44.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..155
NoneNo IPR availablePANTHERPTHR44739FAMILY NOT NAMEDcoord: 165..335
coord: 337..400
coord: 220..388
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 5..95
e-value: 1.8E-8
score: 34.5
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 7..84
score: 13.219
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 345..384
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 285..340
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 246..298
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 3..84

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold297_size217559-snap-gene-0.21-mRNA-1maker-scaffold297_size217559-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11577 ID=Tk11577|Name=Tk11577|organism=Tigriopus kingsejongensis|type=polypeptide|length=518bp
LSRSPFCDVILKCGSESSFAHSAVLAAASGFFEKILHLMMGQPHEASQPS
PFSEHRLVHLEVDDLFVGMEHLFQDILTYMYVGEKGEQLNEAILHSLQLK
LELRRSQPSPSLLSLPGEPPEPGVKVEVPPLIASEPASPHEDPSAAPVAS
PSGDSPPEIKMDVSFCHKCDLLFVSKEEFLIHRQMNCTRKFSCKSCGLLF
TRVQTLLEHLIEVRHGESICSLCHFAAASSSAMDDHLQNHVKVVKRPYFC
LQCDSRFPTRSALIQHLPKHSNETPFLCNICTKGFKWKQALAAHMVTHST
AKRYTCPVCGFSTAHSSVFKSHQRLHNGRTLKCEREDCSFETIRKHNLEQ
HRLTHSKEKQHQCEVCGKAFSLVKNMRRHARQHDDAAPKQECPSSGCHFQ
TLRSDKFLAHRKKCPFNLNPIHGAAGTPSPLSMGPVSGGGKTSSQKNAIL
NNLFNTVNPPNRTITHALPVILTDDTNPLSTATLDVTLQDMLKLSENLVL
ELDSSFNVKVESDATHHS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000210BTB/POZ_dom
IPR036236Znf_C2H2_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
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