Tk11663, Tk11663 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11663
Unique NameTk11663
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length765
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 74..82
score: 55.53
coord: 21..37
score: 29.44
coord: 82..90
score: 42.99
coord: 39..54
score: 45.84
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399c4goldcoord: 18..93
e-value: 3.3E-22
score: 89.8
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 20..91
e-value: 4.0E-17
score: 62.3
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 21..49
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 18..97
score: 17.802
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 18..120
e-value: 1.2E-22
score: 81.9
NoneNo IPR availableGENE3D1.10.565.10coord: 570..763
e-value: 8.8E-7
score: 30.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..187
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 19..755
NoneNo IPR availablePANTHERPTHR24082:SF473ECDYSONE-INDUCED PROTEIN 78Ccoord: 19..755
NoneNo IPR availableCDDcd06916NR_DBD_likecoord: 21..95
e-value: 7.08011E-27
score: 101.87
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 19..106

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold59_size442576-processed-gene-0.4-mRNA-1snap_masked-scaffold59_size442576-processed-gene-0.4-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11663 ID=Tk11663|Name=Tk11663|organism=Tigriopus kingsejongensis|type=polypeptide|length=765bp
MEVTQEDPSSQGLEPRRSKICSVCFGEAETYHLNYGASACFSCRAFFRRT
IQRSRNPVFHCKNGGTCEINVQTRRKCQGCRFRNCIRAGMQPDQVLNDTG
KRTRFRKMIKKQEQDDPNATPVVNETAPVVLRMVKKTKRRPDSSGDEGTG
SHCAQHETADTEGESQDHHLPLSQTSIPAKSPKMAPTPRVLTAKNSNITN
GMFDPIPSQLVSPLIHEVTSMAERLVHPATVSFDFDESQLEVDVPGAMGS
GLPGRQAYIELEPRRPAHMPWNSEVPTYQTNREITRLEANEEEIQSEMEI
QQPFEAGSLPILSCDILEPLNEGRVSHTATSQKTIDELGVIYLALDEHCK
SSRFKVKSSRTAHYRQRKRMMTFLERSKDAWHHACSQTILEYSVFEEWLQ
FHLGQARMTKPLLRAYLYEEKAAELSKYPLLTSCHYIVAMGCLFASGYTT
KLDDQSAILGHMADILTFADWTNQVYECASRETLTNIVSILESMAVFFET
SIRWQESECFFLEITKIIALPYTTEEECWLIRQYERFDRAYSEVSFGEEI
MKEFIMFSYDVPLSKTFVPKMVSVWSERFRRIMKIHEEFNALCDKDQAAL
LGTNVIDAVSLCLAKVENFEDGNKQLKFSLGTLDDSIFKQNYDGVMDVSR
LKTMTLIRINDLTSVVQSPHVIEQFQGISSRLSHLVKSVDVFKLLIFITM
FTTHSQVQSVSIDDVQSKYLTIFKRRLQSRGGSADNFDQFKNALRDIRQL
SKIITEIIARKPSIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001628Znf_hrmn_rcpt
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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