Tk11677, Tk11677 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11677
Unique NameTk11677
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length970
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001508Ionotropic glutamate receptor, metazoaPRINTSPR00177NMDARECEPTORcoord: 504..532
score: 26.9
coord: 663..690
score: 46.43
coord: 854..878
score: 28.4
coord: 591..616
score: 23.46
IPR001320Ionotropic glutamate receptorSMARTSM00079GluR_14coord: 454..831
e-value: 2.3E-77
score: 273.0
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 588..865
e-value: 1.0E-46
score: 158.4
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainSMARTSM00918Lig_chan_Glu_bd_2coord: 464..535
e-value: 1.6E-22
score: 90.9
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainPFAMPF10613Lig_chan-Glu_bdcoord: 453..573
e-value: 1.1E-36
score: 125.4
NoneNo IPR availableGENE3D3.40.190.10coord: 485..564
e-value: 5.5E-132
score: 441.9
coord: 795..847
e-value: 5.5E-132
score: 441.9
NoneNo IPR availableGENE3D1.10.287.70coord: 848..875
e-value: 5.5E-132
score: 441.9
coord: 575..610
e-value: 5.5E-132
score: 441.9
coord: 631..693
e-value: 5.5E-132
score: 441.9
NoneNo IPR availableGENE3D3.40.50.2300coord: 326..335
e-value: 5.6E-115
score: 386.3
coord: 410..432
e-value: 5.6E-115
score: 386.3
coord: 177..306
e-value: 5.6E-115
score: 386.3
NoneNo IPR availableGENE3D3.40.190.10coord: 694..794
e-value: 5.5E-132
score: 441.9
coord: 565..574
e-value: 5.5E-132
score: 441.9
NoneNo IPR availableGENE3D3.40.50.2300coord: 336..409
e-value: 5.6E-115
score: 386.3
coord: 83..176
e-value: 5.6E-115
score: 386.3
coord: 307..325
e-value: 5.6E-115
score: 386.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 938..970
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 938..954
NoneNo IPR availablePANTHERPTHR18966:SF352GLUTAMATE RECEPTOR FAMILY AMPAcoord: 82..912
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 82..912
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 879..970
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 667..690
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 691..853
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 611..666
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 854..878
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..590
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 591..610
NoneNo IPR availableCDDcd06382PBP1_iGluR_Kainatecoord: 69..434
e-value: 1.47956E-109
score: 339.633
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 692..830
coord: 451..573
NoneNo IPR availableTMHMMTMhelixcoord: 856..878
NoneNo IPR availableTMHMMTMhelixcoord: 667..689
NoneNo IPR availableTMHMMTMhelixcoord: 591..610
IPR001828Receptor, ligand binding regionPFAMPF01094ANF_receptorcoord: 81..414
e-value: 2.0E-53
score: 181.6
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 80..428

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold59_size442576-snap-gene-3.26-mRNA-1maker-scaffold59_size442576-snap-gene-3.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11677 ID=Tk11677|Name=Tk11677|organism=Tigriopus kingsejongensis|type=polypeptide|length=970bp
MAAGTGRPSEFTMMASRISLGSRPPLAKWSMIPSIDSRILRAFWVHQSAS
TRRYCTSKRRNFAPPQDGGALFDGSEVTPLESAFIHGINMVNDDRSVLIR
SRLTSAIDKVPQSDSFKASKKVCQMATSGLAAIFGPSDPSTANHIQSISD
TFHIPHIETRWDYSFERGEYAINIHPHPSSLSKAYAEVVKAFGWKSLVLL
YENEDSMIKLQEVLKYPKHVDAIKLTVRQLYTDTDDYRPLLKEIKTSGAT
KIVLDCSFNKIEKVLKQANEIGLISDYHSFVITSLDLERVDFSPYKKSNV
NITGFRMMDTTSPQVANYLKKWNYNAGDGKGESHPLFSENILMYDSVRVV
AKAMDDLAQIEGFSLNPVSCRRSQPLEYGPKIAEYIRRVEYMGLSGEIFF
DANGYRTDFQLDFLEKRRDHMFKIGIWTPDVGINVTLTQSEVEGQIVEKL
QNKTLRITTSDTTPFIMKKVLDVPKEALERMSFEEKYEGYAIDLVRELAK
VLKFKYKFHIVMDGKYGNLDPKTGEWNGMFRELQDQKADMAVIDLSITLE
RQSAVDFTMPFMNTGVGILYKKKAPTAPNLFSFLSPLSLDVWIYMTTAYL
AISIQMFLLARVSPYEWDNPHPCKSDPDELETQFNVKNALWFGIGSFLCQ
GSDILPKAISTRMVAGMWWFFTLIMISSYTANLAAFLTAAKMDVPINSAD
DLAKQTKIKYGTYCCGSTNSFFKGSTIPTYAKLNAFMESAKPSVYTNGNQ
EGIERVRKEEGAYAFFMEGAAIEYHVERTCDLTQIGDLLDSKSYGIALPP
DSPYTSTISNGILHLQESGTLQQLKIKWWKEMHGGGKCTGAAGEDSAQLG
LPNLGGVFIVLLAGMIASCIIAIIEFVWKKRILLQDENESLLADMWADFK
FAVDMRASDTKPVPKESASRAGSKSILNDYGPAALGHEVEKEVKRGEHTE
DESPYATFNDNYSTSKSHKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001508Iono_rcpt_met
IPR001320Iontro_rcpt
IPR019594Glu/Gly-bd
IPR001828ANF_lig-bd_rcpt
IPR028082Peripla_BP_I
Vocabulary: Molecular Function
TermDefinition
GO:0038023signaling receptor activity
GO:0005216ion channel activity
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
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