Tk11762, Tk11762 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11762
Unique NameTk11762
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length214
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 3..27
e-value: 0.47
score: 19.5
coord: 95..117
e-value: 0.051
score: 22.7
coord: 61..84
e-value: 0.0092
score: 25.2
coord: 179..201
e-value: 0.034
score: 23.3
coord: 123..145
e-value: 0.17
score: 21.0
coord: 151..173
e-value: 0.29
score: 20.2
coord: 33..55
e-value: 11.0
score: 12.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 97..117
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 181..201
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 153..173
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 63..84
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 35..55
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 125..145
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 123..153
score: 9.889
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 179..206
score: 13.879
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 33..60
score: 14.316
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 61..84
score: 11.302
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 151..178
score: 14.357
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 3..32
score: 9.016
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 95..122
score: 10.866
NoneNo IPR availableGENE3D3.30.160.60coord: 88..149
e-value: 1.2E-12
score: 49.5
NoneNo IPR availableGENE3D3.30.160.60coord: 61..85
e-value: 7.2E-9
score: 37.5
NoneNo IPR availableGENE3D3.30.160.60coord: 32..60
e-value: 1.8E-9
score: 39.3
NoneNo IPR availableGENE3D3.30.160.60coord: 151..175
e-value: 6.3E-8
score: 34.2
NoneNo IPR availableGENE3D3.30.160.60coord: 176..214
e-value: 4.3E-10
score: 41.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 61..84
e-value: 9.7E-5
score: 22.5
coord: 151..170
e-value: 0.0019
score: 18.5
coord: 123..145
e-value: 0.0052
score: 17.1
coord: 179..201
e-value: 0.0012
score: 19.1
coord: 95..117
e-value: 0.0011
score: 19.2
NoneNo IPR availablePANTHERPTHR24404ZINC FINGER PROTEINcoord: 8..178
coord: 48..213
NoneNo IPR availablePANTHERPTHR24404:SF26ZINC FINGER PROTEIN 613coord: 8..178
coord: 48..213
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 151..201
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 108..160
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 27..79

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold2629_size13770-processed-gene-0.2-mRNA-1snap_masked-scaffold2629_size13770-processed-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11762 ID=Tk11762|Name=Tk11762|organism=Tigriopus kingsejongensis|type=polypeptide|length=214bp
MIYLCEFPDCAFLTRWKSEFETHRKRHLGQRDFGCQHCGKRFFCTRDLNI
HGRVHSGTKPYQCRGCDRTFAQKSQLNTHETKTHPLLTNRQQKWFPCHLC
TKRLATQDGLQIHIASHLGLKPHVCASCGLRFSSRSNLRAHSTRHEPHMG
HECPHCGKSFRLKTMLKEHLWSHTGYRPHHCTSCGRGFKRKQQLEAHLNV
HSGSTPFNCQGSGC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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