Tk11826, Tk11826 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11826
Unique NameTk11826
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length468
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..178
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableCOILSCoilCoilcoord: 363..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..399
NoneNo IPR availablePANTHERPTHR13112UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEINcoord: 1..434
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..82
e-value: 7.9E-29
score: 102.2
IPR005120UPF3 domainPFAMPF03467Smg4_UPF3coord: 1..155
e-value: 5.0E-45
score: 153.5
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..82

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold611_size124749-processed-gene-0.0-mRNA-1snap_masked-scaffold611_size124749-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11826 ID=Tk11826|Name=Tk11826|organism=Tigriopus kingsejongensis|type=polypeptide|length=468bp
LPPSMREEALMEQLSPLPEHDYFYFVGAEVSLEPHAFSRAYINITSSLED
ICIFREKFDGYVFVDELGNEYPALVEFAPYQKIPKNKSQKKKDAKMNTIE
DDPDFLQFKEMVEEREKGYHFTLDQHLEEIQIKEKEKASLEKKSTPLLEF
LKEKQAEKKRIRDEKRGAKKKKDEEKRKTNKDFEKKPNKRDAKKDKDKKK
TDKPEGKKILLREKTEEGQHFEVQSHVSKKESPPKSDKFKRDKPPKRVPK
EPGQDGDKFGGRRRDNERPMMKEKRERIQHRDAPMRPPRDALGTDRGLDH
SPKPLTKPKRYSDRRKEEKIKREMAKNPDASEDPSPMDPMPEPMSKMTFI
GEFDPEQCAESSLSEEQIQRREEIKAKREAERQLRKERLKNKERPEMQIY
RPGMGKFSSKTIREGGKPRELSGSDGSSSMGGGEDDDFGGGSRRGRGRYY
IRGGRGRSRTYVSEGNDN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR005120UPF3_dom
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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