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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006652 | Kelch repeat type 1 | SMART | SM00612 | kelc_smart | coord: 176..224
e-value: 12.0
score: 2.3
coord: 72..117
e-value: 0.17
score: 18.4
coord: 230..272
e-value: 1.4
score: 10.5 |
| None | No IPR available | PFAM | PF13964 | Kelch_6 | coord: 166..214
e-value: 3.1E-6
score: 27.2 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..4 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 14..18 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 19..326 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..18 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 5..13 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..18
score: 0.905 |
| None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..19
score: 0.574 |
| None | No IPR available | SIGNALP_GRAM_NEGATIVE | SignalP-noTM | SignalP-noTM | coord: 1..19
score: 0.764 |
| IPR015915 | Kelch-type beta propeller | GENE3D | 2.120.10.80 | | coord: 144..326
e-value: 1.2E-17
score: 65.8
coord: 15..143
e-value: 2.3E-11
score: 45.2 |
| IPR015915 | Kelch-type beta propeller | SUPERFAMILY | 117281 | Kelch motif | coord: 160..299 |
| IPR015915 | Kelch-type beta propeller | SUPERFAMILY | 117281 | Kelch motif | coord: 20..134 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11841 ID=Tk11841|Name=Tk11841|organism=Tigriopus kingsejongensis|type=polypeptide|length=326bp
MKGMCMSLLLLLLPLGHSAKVLVTTGYNHQNGSVSTSEIVDLTSGPICGP
IADYPLKVKGAVGFVLSGTPTVCGGFDASSREFIDTCFQYERSTNTWLPF
ATLDKHRYASASVPISGDEIWITGGTSYDGDVDQVDGLVPGYIETTEILS
SDGTTRPGIDLPMGSHSHCMVQVEDYVYLFGGEVTYSSRANYRIALSDLE
SGSWEALEDMDYKRYGHTCHVYRDERGQAAIVVVGGDGYGTSETLNVEHL
QWTPGPNILRPLFYAQSVTYLNTFFLLGGSGYSFTYWADILEYQPQSWVP
RGNLSLETLRREFVAISVPDDYCVGK back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
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