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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR009071 | High mobility group box domain | SMART | SM00398 | hmgende2 | coord: 38..108
e-value: 7.5E-26
score: 101.9 |
| IPR009071 | High mobility group box domain | PFAM | PF00505 | HMG_box | coord: 39..107
e-value: 2.2E-22
score: 79.1 |
| IPR009071 | High mobility group box domain | PROSITE | PS50118 | HMG_BOX_2 | coord: 39..107
score: 21.573 |
| IPR036910 | High mobility group box domain superfamily | GENE3D | 1.10.30.10 | | coord: 36..119
e-value: 1.5E-27
score: 97.8 |
| IPR036910 | High mobility group box domain superfamily | SUPERFAMILY | 47095 | HMG-box | coord: 23..110 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 106..165 |
| None | No IPR available | PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | coord: 19..116 |
| None | No IPR available | PANTHER | PTHR10270:SF288 | SUBFAMILY NOT NAMED | coord: 19..116 |
| None | No IPR available | CDD | cd01388 | SOX-TCF_HMG-box | coord: 38..102
e-value: 1.34094E-30
score: 111.236 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11931 ID=Tk11931|Name=Tk11931|organism=Tigriopus kingsejongensis|type=polypeptide|length=498bp
MINIHPSQALILPSMTISNHTKTPYSDATQTKKHPPNHIKRPMNAFMVWS
QRERRKIIEVTPDKHNAEISKELGRRWKLLTVSERQPFIEEADRLRILHQ
QEYPDYKYKPKKKPKGALPEAGLGQVDDKSRNLKRRYRRQRKEVSEKSAV
DYLNQEADSPATPTLPLSVTQLNARVPTSPVCPSPESADGGFYEMSPHAS
PADRILATPPVQTNFDDLVDQSHTTCMYTDEELADLTMEAVGARVGMNTT
FREEISVPVDDLVPTIWSGGFDFDMDNLQPPPTLSLGPPQCHTSTQTTRL
VPQHHSDLFTGDTAALFRSLVHSTHNVMLSEHEIDLSAVDSSLATFINSD
FRENGAKRRRVLDLLSAGMIVKEVIDIVSYSRSLVDKVKKLRQDGKSLTR
SKGSGDHNKKLTDEFLMGVACEIEASPQTSIRRKMAVLAGLLVVGIRDLG
LCGVKGLQDTSQECQRPEGLRGGALGRHRRGLRRDGLLRLQGPCRGHD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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