Tk12432, Tk12432 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12432
Unique NameTk12432
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length592
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 476..498
e-value: 0.8
score: 18.7
coord: 447..470
e-value: 0.16
score: 21.0
coord: 363..385
e-value: 0.07
score: 22.3
coord: 390..412
e-value: 0.0046
score: 26.2
coord: 329..351
e-value: 0.0086
score: 25.3
coord: 298..321
e-value: 0.082
score: 22.0
coord: 418..441
e-value: 0.012
score: 24.8
coord: 242..267
e-value: 33.0
score: 8.7
coord: 272..294
e-value: 0.099
score: 21.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 449..470
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 365..385
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 274..294
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 331..351
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 392..412
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 420..441
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 300..321
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 390..417
score: 11.552
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 447..475
score: 15.667
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 418..446
score: 14.711
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 272..299
score: 10.284
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 329..356
score: 10.388
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 298..326
score: 9.432
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 476..503
score: 9.058
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 363..390
score: 9.099
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 21..110
e-value: 1.6E-5
score: 25.0
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 26..86
score: 10.447
NoneNo IPR availableGENE3D3.30.710.10coord: 5..109
e-value: 7.5E-6
score: 28.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 447..470
e-value: 0.0048
score: 17.2
coord: 329..351
e-value: 0.0064
score: 16.8
coord: 390..412
e-value: 0.0052
score: 17.1
coord: 299..321
e-value: 0.01
score: 16.1
coord: 418..441
e-value: 0.0062
score: 16.8
NoneNo IPR availableGENE3D3.30.160.60coord: 418..442
e-value: 2.9E-6
score: 29.0
NoneNo IPR availableGENE3D3.30.160.60coord: 443..471
e-value: 5.5E-13
score: 50.5
NoneNo IPR availableGENE3D3.30.160.60coord: 219..296
e-value: 1.0E-6
score: 30.6
coord: 356..417
e-value: 1.5E-10
score: 42.9
NoneNo IPR availableGENE3D3.30.160.60coord: 297..355
e-value: 2.6E-8
score: 35.9
NoneNo IPR availableGENE3D3.30.160.60coord: 472..500
e-value: 3.8E-6
score: 28.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..510
NoneNo IPR availablePANTHERPTHR44002FAMILY NOT NAMEDcoord: 167..438
NoneNo IPR availablePANTHERPTHR44002:SF1SUBFAMILY NOT NAMEDcoord: 325..502
coord: 167..438
NoneNo IPR availablePANTHERPTHR44002FAMILY NOT NAMEDcoord: 325..502
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 326..381
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 399..456
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 271..308
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 441..494
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 7..88

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold924_size80766-processed-gene-0.7-mRNA-1snap_masked-scaffold924_size80766-processed-gene-0.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12432 ID=Tk12432|Name=Tk12432|organism=Tigriopus kingsejongensis|type=polypeptide|length=592bp
MCSTFRRNADLLREGFAEILQGAGFVDLRVVASDATLYFHQMVLASASLL
MKTVLGDPEVHNSEIATILLPDFDQTEVLEMVQFLYGLKSFGEKLQSPLV
HTLQLGFDLEMRPPIETSLDECDSLMGDAEPIPSPEPSEDPPIDPRPQAE
VGGRKTIRRSSRKREFEVDGSKVKLSQNTRKKNLERTSGGWKCMKCQVEK
RFQHEFKAHEATCGRQGVNPVKVKKSRTPPAKPVKVNPDLLFSCGGCELS
LASFSELKSHLDTEPEHQDLTFVCETCEKVFTSEPKAEKHQFVHQKEISC
NHCQKPFTNATKYAKHLNNVHRAATEGEHKCPKCSKSFEYLKNFVNHVKR
HETEPDFPVTKEFKCHICQMALSTRSTLLYHVSKHVQSKFPCHRCDKIFK
SERGLKYHLKIHDGQLDYLCSDCGRGFITRQKLLNHRRSKHTFEKPYVCD
ACGQGFIRSDKLVIHKRRAHTGEKPYRCDSCPWRGVDTSALIHHKKRHEN
EERKMRMESSIPEGNEGGEDDDEDESEDDDEEEANPLEHQPTHQILTTLT
DVVMVPDTQIYIPVMTSVVLLPVGNSRSLGGYELLLVLFQPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000210BTB/POZ_dom
IPR036236Znf_C2H2_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
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