Tk12457, Tk12457 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12457
Unique NameTk12457
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length768
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 150..333
e-value: 2.0E-8
score: 44.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..102
e-value: 2.7E-23
score: 84.7
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 418..760
e-value: 1.8E-39
score: 135.8
NoneNo IPR availableGENE3D3.40.50.300coord: 118..365
e-value: 5.8E-62
score: 211.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..388
NoneNo IPR availablePANTHERPTHR43038FAMILY NOT NAMEDcoord: 1..768
NoneNo IPR availablePANTHERPTHR43038:SF4RIBOSOME-ASSOCIATED ATPASEcoord: 1..768
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 623..644
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 682..702
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 734..744
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 764..768
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 656..676
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 745..763
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 645..655
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 677..681
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..417
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 571..593
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 437..570
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 703..713
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 714..733
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 418..436
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 594..622
NoneNo IPR availableTMHMMTMhelixcoord: 655..677
NoneNo IPR availableTMHMMTMhelixcoord: 626..648
NoneNo IPR availableTMHMMTMhelixcoord: 741..763
NoneNo IPR availableTMHMMTMhelixcoord: 571..593
NoneNo IPR availableTMHMMTMhelixcoord: 416..438
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 142..285
e-value: 9.5E-28
score: 97.3
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 126..356
score: 21.976
IPR000412ABC-2 transporterPROSITEPS51012ABC_TM2coord: 536..766
score: 17.339
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..89
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 124..347

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold7529_size3136-processed-gene-0.1-mRNA-1snap_masked-scaffold7529_size3136-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12457 ID=Tk12457|Name=Tk12457|organism=Tigriopus kingsejongensis|type=polypeptide|length=768bp
MKQKLGLCCALIHDPELLILDEPTTGVDPLSRRQFWDLIDSIRAERPEMS
VLVSTAYMEEAERFDWLAAMDSGRILATGSPSELKEQTQTSSLEETFIAL
LDDGKTEKKGPLIIPPLEAADGEPVIVAKGLTRRFGKFTAVDKVSFSIDR
GEIFGFLGSNGCGKTTTMKVMTGLLSASEGTAELFGRAVDARNLETRKRV
GYMSQAFSLYSELTVRQNLVLHARLYDLPKEGVPSRITKLLEQFDLNEVA
DRLSGKLPLGVRQRLSLAVAIIHEPEMLILDEPTSGVDPVARNDFWELLI
DLSRRDKVTIFISTHFMNEAMRCDRISLMHAGKVLACDSPAKIMEARDQP
TLEDAFIDYIKEAIAEGNPSLENSDQKNEVSLEAPENKPASQRSFSISRI
LAYSHREALEVLRDPVRLVFAFVGSALLMLLFGYGLNTDVEDIRYAVMDS
DQTPESRAYLQSLSSSRYFLEQSPITDADALSERMRANDISVAYEIPHDF
GKDLKAGNAPTISVWIDGSAPFRGETIDGYVKGSHLNYLEDLARKSLGEV
PPYLPATIEPRFRYNPSFKSINALVPSIPAMLLILIPAILMALSVVREKE
LGSITNFYVTPSKRIEFIVGKQLPYIFAAMVTFAMLTLMAVYIFKVPIKG
DLRALVIGAFLYVTATTGLGLLISTFTSSQVAAVFGTAILSILPTVQFSG
MLQPVSTLEGSAKAIGYFWPTTYYMHTSVGVFTKGLTLSDLSSDLFKLAL
FIPVFTILTTLVLKKQER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR000412ABC_2_transport
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0043190ATP-binding cassette (ABC) transporter complex
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Add to Basket