Tk12504, Tk12504 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12504
Unique NameTk12504
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length304
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 33..55
score: 33.46
coord: 214..240
score: 28.22
coord: 124..147
score: 19.29
coord: 173..197
score: 30.83
coord: 67..88
score: 20.41
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 2..232
e-value: 6.5E-42
score: 143.5
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 39..55
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..266
e-value: 2.9E-75
score: 255.0
NoneNo IPR availablePANTHERPTHR24238:SF31TACHYKININ-LIKE PEPTIDES RECEPTOR 99Dcoord: 1..238
NoneNo IPR availablePANTHERPTHR24238G-PROTEIN COUPLED RECEPTORcoord: 1..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 2..238
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 213..235
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 28..47
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 1..232
score: 37.965

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold221_size251850-snap-gene-1.11-mRNA-1maker-scaffold221_size251850-snap-gene-1.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12504 ID=Tk12504|Name=Tk12504|organism=Tigriopus kingsejongensis|type=polypeptide|length=304bp
MVSSLNVTFNFVYMLYGHWPFGRLYCKMFSYISIISVCGSVFTLMAISVE
RYNAIVRPLRPRMSRPSTVLTALLIWIVGGVIALPQFLYFTTQVTSSETE
NRTVCFAIWPDGPTNESSFEFLYNVAFMIITYFLPMLSMSITYTAVAREL
WDSKIIGEATKAQMDVIQSKRRVVKMMVMVVFIFGVCWLPYHIYFIISNA
YPEINFSPHIQDIYLAIYWLAMSNAMYNPMIYCFMNSRRFLCPMADFSNQ
NGATNHIELDTATGYNLDVRPHRNGTLHYGQYRPFTHRLPVCNGRRALNQ
DVPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
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