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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001876 | Zinc finger, RanBP2-type | SMART | SM00547 | zf_4 | coord: 47..71
e-value: 9.6E-5
score: 31.8 |
| IPR001876 | Zinc finger, RanBP2-type | PFAM | PF00641 | zf-RanBP | coord: 47..69
e-value: 1.3E-7
score: 30.7 |
| IPR001876 | Zinc finger, RanBP2-type | PROSITE | PS01358 | ZF_RANBP2_1 | coord: 49..68 |
| IPR001876 | Zinc finger, RanBP2-type | PROSITE | PS50199 | ZF_RANBP2_2 | coord: 45..74
score: 9.687 |
| IPR033774 | Yaf2/RYBP C-terminal binding motif | PFAM | PF17219 | YAF2_RYBP | coord: 161..192
e-value: 2.4E-15
score: 55.6 |
| None | No IPR available | GENE3D | 4.10.1060.10 | | coord: 39..78
e-value: 9.5E-9
score: 36.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 65..276 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 228..243 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 244..276 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 163..179 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 186..204 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 205..226 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 126..162 |
| None | No IPR available | PANTHER | PTHR12920 | RYBP AND YAF2-RELATED | coord: 34..244 |
| IPR036443 | Zinc finger, RanBP2-type superfamily | SUPERFAMILY | 90209 | Ran binding protein zinc finger-like | coord: 45..72 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12511 ID=Tk12511|Name=Tk12511|organism=Tigriopus kingsejongensis|type=polypeptide|length=276bp
LPKSNLGSNPGIDTLCPRMEKKSPKGRKRSLKNAPSTSAGPSTAEDGYWD
CSVCTFKNNPEAFKCSMCDVRKGTSTRKPRINPDLVAAQHAQALTPPPPL
STTPTPSGSAYDFKDEEEEEVEEEESPPNKVTKKPPKEKKPKPINSGEKT
PKEKKATQNKARLKNVDRSSATYHSVTVDDLTVVITEFKPKVKKEKKEKK
EAKTTTAGGTTGQNNGSISGSESANGTPKGHHKPKKEENSSDAEESGASA
QSNQEILGRIANENANISNGSAKSAS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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