Tk12518, Tk12518 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12518
Unique NameTk12518
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length572
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 7..145
e-value: 4.6E-103
score: 347.2
coord: 228..395
e-value: 4.6E-103
score: 347.2
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 157..227
e-value: 4.6E-103
score: 347.2
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 8..390
e-value: 1.4E-78
score: 264.2
NoneNo IPR availablePANTHERPTHR15092:SF22POLY A -SPECIFIC RIBONUCLEASE PARN-LIKE DOMAIN-CONTAINING PROTEIN 1coord: 7..518
NoneNo IPR availablePANTHERPTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1coord: 7..518
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 248..396
coord: 5..135

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold455_size166772-snap-gene-0.38-mRNA-1maker-scaffold455_size166772-snap-gene-0.38-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12518 ID=Tk12518|Name=Tk12518|organism=Tigriopus kingsejongensis|type=polypeptide|length=572bp
LSEIMTEVTRSNFEELFPQISSQILDASFVAFDAEFTALNVGQDYRNSLF
DTPSDRYQKLKINASRSIISQIGLAIFRFDKSTMGYTAHVYNFYTFPRSF
GPLDTTFSCQSGALEFLAQNDFDFNKFIYRGIGYLNKTQELVLKNYLEEN
AFCSSAERNVSRENEKVIKAICSDLAEWIQGKSPGVEKAVACGNVSEYII
QSEIRTKFGSLWTSQGKSCEIRVKVVSAEEKNELLAAEDDLIPVLLEQQR
GFSRLIATLISSKKPVVGHNCLYDLVRIYHQFIDDLPPSYADFKTKVHEE
YFPEVFDTKFIAIELQHAFKTQGNIEMSNALSISTPEDLYAALNGQKLEL
YVPCSPNIVLDDESHRMYGNEMASKYHEAGYDAYITGYCFIRLAHAGAIV
NYLSKSTIRHLNFREHRASVFKYANQLQIIWGGSNSLNLAGEDPESKRPP
LLLISSFAGTALPPSKLSDRLASFGPVEVRPFSKSQALVAPANMGTSRKI
VSEFKSDKTLSVVQYQPLLHGKMIRALLWDIFITTYNKLLHPKLLHRGGN
SSSSFQVHANLESGSMALSEEN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR036867R3H_dom_sf
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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