Tk12529, Tk12529 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12529
Unique NameTk12529
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length489
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03054tRNA_Me_transcoord: 122..485
e-value: 1.1E-138
score: 461.9
coord: 11..110
e-value: 3.9E-44
score: 150.8
NoneNo IPR availableGENE3D2.40.30.10coord: 407..489
e-value: 8.9E-33
score: 114.1
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 9..112
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 120..367
IPR023382Adenine nucleotide alpha hydrolase-like domainsGENE3D2.30.30.280coord: 336..405
e-value: 4.9E-25
score: 88.7
IPR004506tRNA-specific 2-thiouridylaseTIGRFAMTIGR00420TIGR00420coord: 122..485
e-value: 4.8E-149
score: 493.9
IPR004506tRNA-specific 2-thiouridylasePANTHERPTHR11933TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASEcoord: 9..111
coord: 120..487
IPR004506tRNA-specific 2-thiouridylaseHAMAPMF_00144tRNA_thiouridyl_MnmAcoord: 122..486
score: 39.528
IPR004506tRNA-specific 2-thiouridylaseCDDcd01998tRNA_Me_transcoord: 123..485
e-value: 0.0
score: 578.322
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 114..334
e-value: 2.1E-92
score: 310.6
coord: 2..113
e-value: 6.1E-46
score: 158.6

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1464_size40078-snap-gene-0.2-mRNA-1maker-scaffold1464_size40078-snap-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12529 ID=Tk12529|Name=Tk12529|organism=Tigriopus kingsejongensis|type=polypeptide|length=489bp
MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDN
EEYCTAAEDLADAQAVCDKLGIHLHTINFAAEYWDNVFEYFLEEYKAGRT
PNPDILCNKGMIQDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEG
LFMKNWEEDDNEEYCTAAEDLADAQAVCDKLGIHLHTINFAAEYWDNVFE
YFLEEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADYIAMGHYVRRTF
PTQEELDAGVKPEMLRGLDGNKDQSYFLYTLSSDQVARSLFPVGELEKPE
VRRIAEEQDLITAKKKDSTGICFIGERKFTEFLGKYLPAQPGNIETPDGQ
VIGQHQGLMYHTLGQRKGLHIGGTKGGGGNEEPWFVGEKDLKRNVLIAVQ
GKDHPLLKSEGLFASQLHWVNRTPITEVMTCTVKTRYRQTDIPCTIIPID
DDNIKVIFDEPQIAVTPGQSAVFYQDEVCLGGGIIEKRI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023382Adenine_a_hdrlase_dom
IPR004506tRNA-specific_2-thiouridylase
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Molecular Function
TermDefinition
GO:0016783sulfurtransferase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
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