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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 204..274
e-value: 7.2E-11
score: 43.1 |
| None | No IPR available | PANTHER | PTHR13407 | RNF121 PROTEIN | coord: 11..315 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 128..156 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 162..179 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 180..289 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 42..60 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 67..83 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 313..315 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 89..107 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..41 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 84..88 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 108..127 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 157..161 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 61..66 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 290..312 |
| None | No IPR available | CDD | cd16475 | RING-H2_RNF121_like | coord: 212..266
e-value: 3.78837E-33
score: 114.31 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 207..278 |
| None | No IPR available | TMHMM | TMhelix | | coord: 88..107 |
| None | No IPR available | TMHMM | TMhelix | | coord: 290..312 |
| None | No IPR available | TMHMM | TMhelix | | coord: 162..179 |
| None | No IPR available | TMHMM | TMhelix | | coord: 135..157 |
| None | No IPR available | TMHMM | TMhelix | | coord: 67..84 |
| None | No IPR available | TMHMM | TMhelix | | coord: 38..60 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 214..264
score: 10.675 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12531 ID=Tk12531|Name=Tk12531|organism=Tigriopus kingsejongensis|type=polypeptide|length=315bp
SLQSIDWSSVDWEKLTPEEKWRLEHIKLHEKHRGHESMHAEMVLILFATL
VISQIALVKWKQVYPQSYHLVTLLGMWIIPVLMSAKNLWWRFILIWVVMS
TISGIIMRRAAVKPIDGTTPRIVYKWFLLMYKASYAIGLIGYVIMMATFL
GLYIFFGVKPHVWMDFGILLMFYALYYGVMARDFAEICAEKMASNLGYYK
PEGIPSRQLESDMCALCGNKFLVKVGEEGVVENTYRLSCAHEFHEFCIRG
WCIVGKKQTCPYCHEKVDLKRMFPNPWEKPHMMYGQLLDWLRWLVCWQPI
ILVLVQGINWALGLE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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