Tk12536, Tk12536 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12536
Unique NameTk12536
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length96
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 71..90
score: 35.81
coord: 35..54
score: 40.81
coord: 15..34
score: 55.14
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 8..94
e-value: 1.3E-30
score: 104.9
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 10..70
score: 16.726
NoneNo IPR availableGENE3D1.20.5.110coord: 1..95
e-value: 2.8E-35
score: 122.6
NoneNo IPR availablePANTHERPTHR21136:SF78VESICLE-ASSOCIATED MEMBRANE PROTEIN 3coord: 6..92
NoneNo IPR availablePANTHERPTHR21136SNARE PROTEINScoord: 6..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..96
NoneNo IPR availableCDDcd15870R-SNARE_VAMP2coord: 10..71
e-value: 3.38147E-28
score: 94.7597
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 7..72
NoneNo IPR availableTMHMMTMhelixcoord: 76..95
IPR016444Synaptobrevin/Vesicle-associated membrane proteinPIRSFPIRSF005409VAMP-5_synaptobrevincoord: 1..95
e-value: 1.6E-31
score: 106.4

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold262_size232883-processed-gene-0.10-mRNA-1snap_masked-scaffold262_size232883-processed-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12536 ID=Tk12536|Name=Tk12536|organism=Tigriopus kingsejongensis|type=polypeptide|length=96bp
MATQSGDSNRLEETRRQVDEVQNIMKANVDKVLERDGKLGQLEERADRLQ
EGTEQFHRSAVRIKRKQFWENMKMKIIIGVVISVIVLAILIWLFSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin
IPR016444Synaptobrevin/VAMP
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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