Tk12543, Tk12543 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12543
Unique NameTk12543
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length843
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 708..742
NoneNo IPR availableGENE3D3.30.54.20coord: 614..667
e-value: 4.6E-51
score: 174.8
NoneNo IPR availableGENE3D3.30.980.10coord: 668..685
e-value: 4.6E-51
score: 174.8
coord: 547..613
e-value: 4.6E-51
score: 174.8
NoneNo IPR availableGENE3D3.30.930.10coord: 1..241
e-value: 1.5E-116
score: 390.1
NoneNo IPR availableGENE3D2.40.30.130coord: 443..542
e-value: 2.8E-11
score: 45.3
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 1..800
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 1..800
NoneNo IPR availableCDDcd00673AlaRS_corecoord: 3..240
e-value: 1.59764E-141
score: 415.606
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 2..244
IPR002318Alanine-tRNA ligase, class IIcPRINTSPR00980TRNASYNTHALAcoord: 271..287
score: 52.26
coord: 295..308
score: 72.8
coord: 225..238
score: 72.8
coord: 198..209
score: 71.47
coord: 74..85
score: 67.63
IPR002318Alanine-tRNA ligase, class IIcTIGRFAMTIGR00344TIGR00344coord: 5..782
e-value: 1.3E-297
score: 987.6
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 643..686
e-value: 1.3E-20
score: 84.5
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 643..686
e-value: 6.9E-18
score: 64.4
IPR001048Aspartate/glutamate/uridylate kinasePFAMPF00696AA_kinasecoord: 748..839
e-value: 1.2E-10
score: 41.3
IPR036393Acetylglutamate kinase-like superfamilyGENE3D3.40.1160.10coord: 745..843
e-value: 2.2E-23
score: 85.0
IPR036393Acetylglutamate kinase-like superfamilySUPERFAMILY53633Carbamate kinase-likecoord: 748..841
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 5..543
e-value: 3.3E-223
score: 742.1
IPR018042Aspartate kinase, conserved sitePROSITEPS00324ASPARTOKINASEcoord: 749..757
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..699
score: 130.442
IPR023033Alanine-tRNA ligase, eukaryota/bacteriaHAMAPMF_00036_BAla_tRNA_synth_Bcoord: 1..843
score: 172.905
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 445..542
IPR018162Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilySUPERFAMILY101353Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)coord: 245..436
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 543..701

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1010_size71100-snap-gene-0.3-mRNA-1maker-scaffold1010_size71100-snap-gene-0.3-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12543 ID=Tk12543|Name=Tk12543|organism=Tigriopus kingsejongensis|type=polypeptide|length=843bp
MKVSQIRSKFIEYFNSQGHKEVASSSLIPGNDPSLLFTNAGMVQFKDVFL
GFDKRDYKRAVTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
FKQEAIEFAWNLLTKELGLPKDKLWITVFEEDDEAEDIWVKHIGVPKERV
IRIGAKDNFWAMGDTGPCGPCSEIFYDHGEDVAGGPPGSPDEDGDRYIEI
WNLVFMQYNRDADGVMTPLPKPCVDTGMGLERIAAVLQHVHSNYEIDLFV
NLISAAAKVTNSRDLKNKSLAVIADHIRSTAFLIVDGVTPSNEGRGYVLR
RIIRRAIRHGYQLGCQTPFMHLLIDSLISEMGEAYPELVQQKAHLEKILY
NENERFLETLDLGLGLLDKEIAVLSDKQIPGDVIFKLYDTYGFPVDLTND
VARERGLTLDLDGFESCMSQQRQQARSANSFVSKTQVHIDGIENTLFNGY
TQTSGSAKIIALQVDDRAVKTLTIGKQAVLVLDQTPFYAESGGQTGDKGI
IKTATAEFKVCDTQKFANKVIGHIGQVIKGEIKIDDEVVTQVNDITREQT
QNNHSATHLLHAALRVVLGDHVQQKGSLVESERLRFDFSHYEPITSDQLS
QVGHIVNQQIRHNCEVTTTQMDLEEAKEKGAQALFGEKYEDQVRVVAMDD
FSLELCGGTHVSRTGNIGLFSITSETGIAAGVRRIEAITAQAAIDWSDEQ
HLKLNHLSQVLKTNVDSIEHKIEQLLQKNRELEKDKQQLQSKNTVAIYVE
KYGGTSVANVERINAVADNVERSHKLGHKLVVVLSAMSGETNRLLGLAKE
IHPDAGAREIDVLVSTGEQVTISLLAMALQKRGIDARSYTGGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002318Ala-tRNA-lgiase_IIc
IPR012947tRNA_SAD
IPR001048Asp/Glu/Uridylate_kinase
IPR036393AceGlu_kinase-like_sf
IPR018164Ala-tRNA-synth_IIc_N
IPR018042Aspartate_kinase_CS
IPR018165Ala-tRNA-synth_IIc_core
IPR023033Ala_tRNA_ligase_euk/bac
IPR009000Transl_B-barrel_sf
IPR018162Ala-tRNA-ligase_IIc_anticod-bd
IPR018163Thr/Ala-tRNA-synth_IIc_edit
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0004813alanine-tRNA ligase activity
GO:0004072aspartate kinase activity
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0043039tRNA aminoacylation
GO:0006419alanyl-tRNA aminoacylation
GO:0008652cellular amino acid biosynthetic process
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