Tk12558, Tk12558 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12558
Unique NameTk12558
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length434
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..392
IPR000451NF-kappa-B/DorsalPRINTSPR00057NFKBTNSCPFCTcoord: 48..65
score: 28.74
coord: 202..216
score: 45.51
coord: 233..253
score: 31.68
coord: 311..325
score: 30.72
IPR000451NF-kappa-B/DorsalPANTHERPTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINcoord: 30..423
IPR037059Rel homology domain (RHD), DNA-binding domain superfamilyGENE3D2.60.40.340coord: 31..214
e-value: 2.3E-48
score: 166.2
IPR032397Rel homology dimerisation domainPFAMPF16179RHD_dimercoord: 220..322
e-value: 3.6E-18
score: 65.4
IPR011539Rel homology domain (RHD), DNA-binding domainPFAMPF00554RHD_DNA_bindcoord: 44..213
e-value: 6.4E-38
score: 130.2
IPR011539Rel homology domain (RHD), DNA-binding domainPROSITEPS50254REL_2coord: 39..217
score: 43.963
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 217..322
e-value: 7.4E-17
score: 63.2
IPR008967p53-like transcription factor, DNA-bindingSUPERFAMILY49417p53-like transcription factorscoord: 41..217
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 219..323

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1273_size51358-snap-gene-0.9-mRNA-1maker-scaffold1273_size51358-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12558 ID=Tk12558|Name=Tk12558|organism=Tigriopus kingsejongensis|type=polypeptide|length=434bp
MMAPSQRKKELFITTRPEKKPNVKELDASMALKKAEARLEDPYVVISEQP
ATDNVRFYSEVDDKTKPPSSIPGVTSTPEKKTYPAIGIRNFDGDAVVVVS
CVSGEEPHRAHPHKLVWREGKTEKGVCSANVKRKDMTCELRGLSIDYVKK
IHVKRSLEERRQIRVDPFKQGFEHMDMDINLSAVRLCFQVFLKLTDGSLK
PLKPVVSHIIKDKKRSGMVQILEISDTQIPAEGNKKVLFFCDRMQKSDME
LKVLEKNGQGQIVWSHPVSQSQMKPSRFGGVSFIAPPYQNCSISEPVKVQ
LILTRLSDQKSSEPVSLVYVPSLSNVGKEVEGGDDITRGTSTFSVMNMDG
NNPPLIEDFQSDHRMMTLKSSLNTLTKVLEAEKEANRLLTQRTSSLQSEM
DSVKTDLKVMELELKTGKEDKGRVQDKNELLQGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000451NFkB/Dor
IPR037059RHD_DNA_bind_dom_sf
IPR032397RHD_dimer
IPR011539RHD_DNA_bind_dom
IPR013783Ig-like_fold
IPR008967p53-like_TF_DNA-bd
IPR014756Ig_E-set
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
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