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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000569 | HECT domain | SMART | SM00119 | hect_3 | coord: 471..813
e-value: 2.2E-103
score: 359.4 |
| IPR000569 | HECT domain | PFAM | PF00632 | HECT | coord: 503..813
e-value: 8.1E-86
score: 288.2 |
| IPR000569 | HECT domain | PROSITE | PS50237 | HECT | coord: 473..813
score: 87.29 |
| IPR000569 | HECT domain | CDD | cd00078 | HECTc | coord: 453..811
e-value: 1.12335E-115
score: 352.638 |
| None | No IPR available | GENE3D | 3.30.2160.10 | | coord: 571..665
e-value: 1.3E-81
score: 275.5 |
| None | No IPR available | GENE3D | 3.90.1750.10 | | coord: 666..698
e-value: 1.3E-81
score: 275.5
coord: 455..570
e-value: 1.3E-81
score: 275.5 |
| None | No IPR available | GENE3D | 3.30.2410.10 | | coord: 700..812
e-value: 4.0E-35
score: 122.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 116..135 |
| None | No IPR available | PANTHER | PTHR11254 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE | coord: 169..811 |
| None | No IPR available | PANTHER | PTHR11254:SF353 | E3 UBIQUITIN-PROTEIN LIGASE HECTD2-RELATED | coord: 169..811 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 538..559 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..537 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 560..813 |
| IPR035983 | HECT, E3 ligase catalytic domain | SUPERFAMILY | 56204 | Hect, E3 ligase catalytic domain | coord: 446..806 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12673 ID=Tk12673|Name=Tk12673|organism=Tigriopus kingsejongensis|type=polypeptide|length=813bp
MSEVVQGPRSNGHITSATRHRGGRRGRSSRLELICPNCKVIIDGPAQGMS
YRSCPYCGSSYANTLKKPSRRGARSASPRLPRVPQSKEEVSRASAVGNLL
KSSLTSLTLGSLGLNSQRNDSDRLPAVPDGTKNKLVQYGSGNVKTRGQGL
PTSGQASPVFYEPVDMDQDKYNALVAEVKQSKDYTPLQSFIESTFRSPAS
ICSTFKHNPNQDGARMDDPEIDYELLFAIYDSVKAMNVTMQKSLIRSAVS
CLLDDTTVLYAKDHTRCLFVLLLNPLFVSQSTYTILAHLLQKVTRLPNGE
HQLLVHWFRTLPKDRFRAIIQELLQFVTIRQFPPADKSLPPLSKSRWWIP
TATKVLALVNASNNLRLPASVDYTEFYNMSLDHMDLMQEYYTWQNPERAN
QFSYCQYPFILSIVAKQHILTKDSEQQMILTARRSLVQKMTRHQQPHIEI
FFLNISVRRDHLVEDSLKEISEKQKDLKKKLKISFTGEPGLDMGGLTKEW
FQLLIKSIFEPEYGMFVYYPHSRCYWFSLSKEGNLREYNLIGVLMGLAVY
NSIILDLHFPPMCYRKLLTPPVVPANDGAPVGIVPSLTVSDLRDIMPDVT
QSLANVLEYEGDIAEDLMLTFSVSVEEYGKVFTTDLKPNGDDITVTNENR
KEFVQLYLEWLLNSTIRERFNAFYLGFHSVCASNALIMLRPEEVEQLVCG
SQTFDVTELKKVTFYDGYKVDDPTIICFWEVLEDYSEDLQKKFLRFTTGS
DRVPVGGTGDMTIKITRMKDRNHHLPIAHTCFNQIGLPDYKDKDRLKRKL
TIAISNAEGFGLE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0004842 | ubiquitin-protein transferase activity |
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