Tk12676, Tk12676 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12676
Unique NameTk12676
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1451
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 58..135
e-value: 3.7E-5
score: 33.1
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 831..914
e-value: 6.4E-7
score: 39.0
coord: 281..379
e-value: 3.9E-7
score: 39.7
coord: 513..595
e-value: 9.9E-10
score: 48.3
coord: 722..808
e-value: 2.3E-4
score: 30.5
coord: 1244..1323
e-value: 1.2E-12
score: 58.1
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 515..598
e-value: 6.8E-13
score: 48.7
coord: 283..382
e-value: 9.9E-9
score: 35.3
coord: 1246..1326
e-value: 7.4E-13
score: 48.6
coord: 833..917
e-value: 9.5E-9
score: 35.4
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 515..610
score: 21.057
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1246..1336
score: 20.079
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 283..394
score: 12.316
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 833..927
score: 19.464
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 724..822
score: 12.395
IPR003961Fibronectin type IIICDDcd00063FN3coord: 833..924
e-value: 1.53857E-11
score: 59.8175
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1244..1333
e-value: 7.45111E-20
score: 83.3147
IPR003961Fibronectin type IIICDDcd00063FN3coord: 722..815
e-value: 1.21313E-7
score: 48.6467
IPR003961Fibronectin type IIICDDcd00063FN3coord: 515..605
e-value: 8.11702E-18
score: 77.5367
IPR003961Fibronectin type IIICDDcd00063FN3coord: 281..389
e-value: 5.57155E-11
score: 58.2767
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 1047..1138
e-value: 1.4
score: 17.9
coord: 52..145
e-value: 2.2E-8
score: 43.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1033..1140
e-value: 1.7E-8
score: 36.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 505..621
e-value: 2.0E-16
score: 61.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 718..819
e-value: 2.4E-8
score: 36.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 41..146
e-value: 1.5E-17
score: 65.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 270..384
e-value: 2.5E-11
score: 45.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1238..1336
e-value: 1.8E-20
score: 75.1
coord: 820..927
e-value: 1.5E-14
score: 56.0
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 54..131
e-value: 5.7E-6
score: 26.2
IPR002602Domain of unknown function DBPFAMPF01682DBcoord: 1150..1236
e-value: 8.3E-13
score: 48.4
coord: 414..505
e-value: 2.4E-14
score: 53.4
coord: 180..273
e-value: 2.7E-13
score: 50.0
coord: 626..714
e-value: 1.7E-11
score: 44.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1404..1429
NoneNo IPR availablePANTHERPTHR44146FAMILY NOT NAMEDcoord: 966..1336
coord: 280..390
coord: 718..806
coord: 812..926
coord: 510..608
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1373..1451
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1351..1372
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1350
NoneNo IPR availableTMHMMTMhelixcoord: 1350..1372
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 45..140
score: 9.809
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 50..144
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 1040..1138
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 504..608
coord: 280..394
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 720..814
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 832..929
coord: 1235..1335

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold22_size673200-snap-gene-3.19-mRNA-1maker-scaffold22_size673200-snap-gene-3.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12676 ID=Tk12676|Name=Tk12676|organism=Tigriopus kingsejongensis|type=polypeptide|length=1451bp
MVHEITTTQVGGMNQNGMYQADHIAFRPAFGGHYWRSACFKEQSPQLEGN
LPATQVKAEGQEALFTCIARNLQNNTVIWKYGADKILTAGTVRVTQKQNI
QVLHDEGGNVYVLSISNLTPHDSGLYVCEINSTPPTRTFHKLTVLSSNLS
VPHEIRAVNTSMDVWGFSTPSPIAHDYSSCCVGLGVSSQCLGFCNIRNIL
EGKAGSNPAECEKDFPNIVLCMADGKNHAPCCQEAQVPDICQDMCSGKYN
QRTDSLKTHLSCSAFTAPTLACIAKGISILPGRPVELEATDLSSTSFTLK
WLPATTTASELTQDYFQITLETLGEMNHKNLKNALPMPQLRPSESFKVPG
NVFEYAMEALTPFTLYNATVTALNQHGESLPSYNLLILTHTKGESMWTQA
QGKALPDLPDFKQCCLSKNITHTSCADTFCDFEKVQNVSVPDLMVCAPWT
GSMFDCLFDGQDHTQCCQDNGLPDVCLGFCNGSIKTVDFSHFKCMKYMAQ
ISQCIMKQHNVLSTAPRDFRFSNIGSNTGLIHWNTPRINGEHVQSYLVHY
REMMPRNLGEEVIQSTEHTVYILEDLVPDTSYEVYVEPVNQYGIGESSTR
IVFKTATSPDDSQDEAEDTYESHQRCCIASGVRSLPLCSYNVTMTEVRSL
AKLCVSELSRLTTCAAGGKDHMPCCARRGVPTECQPLCQGIQPSPGTSTM
DKCLSYAGNILTCLEEGSLSLPEPVHNFHTTFLGKGVVAFEWEHPNTTED
VSQFELYYKKLYNNSNTEHIFTENENINATGLTQTITDLDTDARYQFFII
SRNPWGTSLPSSLITLNMSGEATKTVMEGVATAPHSVIVTKKGPDFLSLT
WTNPTISHPLDYLRYVVYYRSLTNTGENVTHSVETPFNAMQITKLNPNTQ
YIIFLTTKTMAGESEPSETLIVWTNPIIPAYAEVTPTTRQLIALVLILSN
FLFFQAPTIHPKEGILEGDSVSVLCIGMGSPTPNLTLYIAGHPIRMTQGR
HMATTVHNISRHMDRVACHADNGFGSPMLSSRQIAIGRQPSFTSHPPGSI
QAKEGQPLLLEFHLDASPHAQIRIGREGVSMKMTERFAVQVIQDPNDRFA
SKAVINITSCLPIDSGDYYIHANNSVGSLVHEFTLRINANIPQTEDSKSC
CQRLNVTEECQPLCSLNLDLDFLIARPQCFAEFDKLMHCAADGSDHRHCC
SMAGVPSACLDWCRGIEVHEDEFCALTHARDIHNCFGEGKYTLPGAPRNI
KVTPISADSAKANWDPPTKNPTAVELYRVLYRKKGERFAEKIDTPETEIT
ISNLTPGVTYELVVKAGNSNGTSQLSAPLQFFTANHYLVETTQIYSPVPS
IVGVLVAVCLLVPLAMFAIWYVKTHKTVSRSSSTAGSFDNPFFNQEIYMN
QIGDDQDPAPSMTVPRPEPHQPQNLEDTECDPTFYEEVKLGKKGEGFKRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003961FN3_dom
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR002602DB
IPR007110Ig-like_dom
IPR036179Ig-like_dom_sf
IPR036116FN3_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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