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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR000742 | EGF-like domain | SMART | SM00181 | egf_5 | coord: 173..214
e-value: 6.6E-4
score: 29.0 |
| IPR000742 | EGF-like domain | PFAM | PF00008 | EGF | coord: 174..211
e-value: 8.2E-5
score: 22.7 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 170..214
score: 12.633 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 168..219
e-value: 8.4E-27
score: 94.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 56..96 |
| None | No IPR available | PANTHER | PTHR12332 | FAMILY NOT NAMED | coord: 131..255 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 259..382 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 237..258 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..236 |
| None | No IPR available | CDD | cd00054 | EGF_CA | coord: 183..214
e-value: 0.00160154
score: 33.7642 |
| None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..20
score: 0.612 |
| None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 179..224 |
| None | No IPR available | TMHMM | TMhelix | | coord: 237..259 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 202..213 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 202..213 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12684 ID=Tk12684|Name=Tk12684|organism=Tigriopus kingsejongensis|type=polypeptide|length=382bp
LCRVCVCLYHVSSPLSRSVAFHPPLPRMCCDHPCPDGDWEAWTRVPPTHH
AHLPTSCHNHTVGGPHEATAHPHPLHPRHTSSSDEELGPASSSPTPLTAR
SLVISLGASRSEAGSRPASAAARLFSQYSMLVLVCLCLCLPHCAESCSSR
STPKPRPPSQNAMRPNITFQTYACPPAYAAWYCLNGATCFTVKIADSILY
NCECADGYMGQRCEFKDLDGTYMPARERLMMIKNSKVGQVLILGIAVIVT
VVIISAIATKIRTRIKLRTIATATVNQLRQNQFSSIGMGDNVLPAGDIMG
QSISYQLSSGCQDNDVSSYQPWPRRPAYEGESRSRTAVAGVSGTSVLMRG
ANVLDQASTSFCNPRASLTTARRAPMMQSRIS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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