exosome complex component rrp43, maker-scaffold552_size138156-snap-gene-0.29 (gene) Tigriopus kingsejongensis

Overview


Name	exosome complex component rrp43
Unique Name	maker-scaffold552_size138156-snap-gene-0.29
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of exosome complex component rrp43 vs. L. salmonis genes
Match: EMLSAG00000008750 (supercontig:LSalAtl2s:LSalAtl2s543:201996:206114:1 gene:EMLSAG00000008750 transcript:EMLSAT00000008750 description:"maker-LSalAtl2s543-augustus-gene-1.61")

HSP 1 Score: 233.417 bits (594), Expect = 1.707e-70
Identity = 123/276 (44.57%), Postives = 182/276 (65.94%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSN-LTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQ-FKP-GPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFE-DQIMVDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            F+ +QP EYF  H++ G R DGR   L  L P+S S  +I +ADGS+I+K+G TIV+CG+ L++A P    P++GF+VP+VD P +C+P+ +K  G   +  QV SKF+ +VL NSG+++L  LCI   +Y+WVL +D  CLNHDGNV D  + AL+ AL ++ +P+V   E+ED+       ++V   + S+L L+  P++ TMAI E D+I+VDPTEEEES A   +T+VLDA   ++ +F K GG  +S   L + T LA++   T+ KLI+K
Sbjct:  689 FRRVQPKEYFNQHVDKGLRLDGREGGLDSLXPLSXSXXSIXTADGSSIIKKGNTIVICGITLQIATPTEEHPNRGFIVPHVDLPTMCNPRNYKSRGQISDEIQVLSKFVMDVLENSGVINLDTLCIVPGEYAWVLKIDFSCLNHDGNVKDAIITALILALKEVKMPKVETFEEEDS---DKTLIKVVKNKYSQLQLQCIPVSVTMAIMEGDKILVDPTEEEESFAPDSITLVLDAE-DEMCYFAKLGGNPISDELLDKITNLARQQALTVRKLINK 960

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BLAST of exosome complex component rrp43 vs. L. salmonis genes
Match: EMLSAG00000000002 (supercontig:LSalAtl2s:LSalAtl2s1000:41727:44138:1 gene:EMLSAG00000000002 transcript:EMLSAT00000000002 description:"maker-LSalAtl2s1000-snap-gene-0.12")

HSP 1 Score: 73.1738 bits (178), Expect = 2.582e-16
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 0

Query:   39 ELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVP---------NVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAAL 168
            +L  +SIS G I + DGS+IVK+   IVVCG  L++  P    P++G ++          N+    L   ++ P            F+ +VL NS +++L+ L I   +YS VL ++  C NH G+V D  +  L+ AL
Sbjct:    6 DLLALSISSGFITTVDGSSIVKKENNIVVCGTTLQITSPREEYPNRGIIIYLLCTNLGTINLLDKSLIKSRYSP-----------NFVMDVLKNSVVINLESLYIVSREYSRVLEINFHCPNHGGSVKDAIITPLLLAL 133

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|122135904|sp|Q2KHU3.1|EXOS8_BOVIN (RecName: Full=Exosome complex component RRP43; AltName: Full=Exosome component 8; AltName: Full=Ribosomal RNA-processing protein 43)

HSP 1 Score: 270.781 bits (691), Expect = 1.305e-89
Identity = 133/273 (48.72%), Postives = 186/273 (68.13%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGSA+VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS I+  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSCLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEE-GRLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|21759409|sp|Q96B26.1|EXOS8_HUMAN (RecName: Full=Exosome complex component RRP43; AltName: Full=Exosome component 8; AltName: Full=Opa-interacting protein 2; Short=OIP-2; AltName: Full=Ribosomal RNA-processing protein 43; AltName: Full=p9)

HSP 1 Score: 265.388 bits (677), Expect = 2.181e-87
Identity = 130/273 (47.62%), Postives = 185/273 (67.77%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+I +ADGSA+VK G T V+CG+K E A P  + PD+G++VPNVD PPLC  +F+ GPP E AQVAS+FI +V+ NS I+  +DLCI   K  WVL+ DL+CL++DGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPT EEE LA   +T+V+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGR-ELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|21759414|sp|Q9D753.1|EXOS8_MOUSE (RecName: Full=Exosome complex component RRP43; AltName: Full=Exosome component 8; AltName: Full=Ribosomal RNA-processing protein 43)

HSP 1 Score: 261.536 bits (667), Expect = 5.720e-86
Identity = 128/273 (46.89%), Postives = 185/273 (67.77%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+I +ADGSA+VK G T V+CG+K E A P  + PD+G++VPNVD PPLC  +F+ GPP E AQV S+FI +V+ NS ++  +DLCI   K +WVL+ DL+CL++DGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPT EEE L+   +TVV D   G L   HKPGG+ L+  KLQ+C + A   +K ++KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEEEHLSTGTLTVVTD-EDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDE 268

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|1723274|sp|Q10205.1|RRP43_SCHPO (RecName: Full=Exosome complex component rrp43; AltName: Full=Ribosomal RNA-processing protein 43)

HSP 1 Score: 204.142 bits (518), Expect = 1.629e-63
Identity = 100/266 (37.59%), Postives = 164/266 (61.65%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGA---KVEVNTAQRSKLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHY 274
            FK I P +Y  H +    R DGRS ++E R + I+   I +A+GSAI++ G+ + VCG+K E+A P  N P++G++VPN++  PLC  +FKPGPP + AQV S+ +H+ L  S +++L+ LCI E K +WVL+ D++CLN+DG+  D A  AL AAL  + LP     ED + V+ A      V+++T  RS           + ++F+D+++ DPT+EEE L+   +T++L+ ++ ++V   K GG  +    L++C  +A+  +
Sbjct:   17 FKKITPEQYLSHLLNQDVRSDGRS-VSEFREIVINDNCISTANGSAIIRAGENVFVCGIKAEIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSLCIFEKKAAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLPTAVWDEDLERVICASTLTRPVQLSTEVRS----------FSWSVFDDKLLADPTDEEEDLSTEFLTIMLN-SSKNIVKIIKLGGTHIQPLLLKKCIEVARSKF 270

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|29336820|sp|Q8TYC2.1|RRP42_METKA (RecName: Full=Exosome complex component Rrp42)

HSP 1 Score: 153.295 bits (386), Expect = 7.126e-44
Identity = 84/257 (32.68%), Postives = 140/257 (54.47%), Query Frame = 0

Query:   25 IENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLI 281
            I  G R DGR +  E RP+ +  G I  A+GSA+V+ G T +V G+KLE+  P+ + P++G +  N +  PL  P F+PGPP E A   S+ +   +  S ++DL++LCI+E ++ WV  +D+  L+HDGN+ D ++   V+AL+   +P+  +V+DE         VEV       L +   PI+ T+A   + ++VDP  EEE +    +TV +   +G++    K        H L++   LA K  + + + +
Sbjct:   18 IRAGERIDGR-DFEEFRPIEVRAGVISKANGSALVRLGNTQLVVGVKLEVGRPYPDSPNEGALAVNAELVPLADPSFEPGPPDENAIELSRVVDRGIRESEMIDLEELCIEEGEHCWVTFVDIHVLDHDGNLFDASMIGSVSALSITEVPKAEVVDDE---------VEVMEEDTEPLAINDFPISVTIAKVGEYLLVDPCLEEEVIMDTRLTVTV-TESGEVCAVQKGELGDFPEHLLEDAIDLATKKAEEVRRTV 263

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|29336897|sp|Q975G9.1|RRP42_SULTO (RecName: Full=Exosome complex component Rrp42)

HSP 1 Score: 135.191 bits (339), Expect = 9.991e-37
Identity = 85/254 (33.46%), Postives = 135/254 (53.15%), Query Frame = 0

Query:   19 EYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKP-IACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAK 271
            E   + +E G R DGR N ++ RP+S++      A+GSA+VK G T+V+ G+KLE   P  + P+QG +V NV+  PL +  F+PGPP E A   ++ +   L +S  VDL  L I   K  W   +D+  L++ GNVLD    A VAAL +  LP+V I          G  V++   +++ +T  + P +  T+A     ++VDP+ +EES+A   ++       G +V   K    +LS  ++    +LA+
Sbjct:   17 ESILNALERGIRLDGRKN-SDYRPISVTLNYAKKAEGSALVKLGDTMVLAGVKLEEEEPFPDTPNQGNLVVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKAVDLSKLVIIPGKKVWTAWVDVYVLDYGGNVLDACTLAAVAALYNTKLPKVEI---------EGDNVKIIKEEKTDVTPIAYPVVTVTVAKIGKYLVVDPSLDEESIADVKISFSY-VQDGRIVGMQKSNFGSLSLQEVDVAESLAR 259

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|121687882|sp|Q0W2Y7.1|RRP42_METAR (RecName: Full=Exosome complex component Rrp42)

HSP 1 Score: 134.42 bits (337), Expect = 1.173e-36
Identity = 81/259 (31.27%), Postives = 124/259 (47.88%), Query Frame = 0

Query:   19 EYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTI 277
            +Y       G R DGR    E R +S+  G I  A+GSA VK G + VV G+K++   P  + PD G ++ N++  PL  P F+ GPP E A   ++ +   +  SG +DL  LCI+  +  W++ +D+  L+HDGN++D A    +AAL    +P       ED                 KL L   PI  T       IM+DP+ +EES+A   +TV+ +   G +    K G   L+  ++     LAK+    +
Sbjct:   12 DYIYSLANQGDRADGR-KFDEFRAISVETGVINKAEGSARVKIGDSQVVVGVKIQPGEPFPDTPDSGVIITNLELVPLASPTFESGPPREDAIELARVVDRGVRESGAIDLSKLCIESGQKVWMVFIDVHVLDHDGNLMDAASLGAIAALKATKIPNSKFGLGEDV----------------KLPLNDVPIGVTAVNIGGAIMLDPSLDEESVAPCKLTVITN-KEGAISGMQKSGVGTLTPDQINHIIRLAKEKANVL 252

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|29336572|sp|O26778.1|RRP42_METTH (RecName: Full=Exosome complex component Rrp42)

HSP 1 Score: 134.806 bits (338), Expect = 1.313e-36
Identity = 84/260 (32.31%), Postives = 140/260 (53.85%), Query Frame = 0

Query:   25 IENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDKA 284
            I N  R DGRS L E R +SI  G I  A+GS+ VK G T ++ G+K ++  P  + P+ G ++ N +  P+  P F+PGPP E +   S+ +   +  S ++DL+ LCI E    W+L +DL  +++DGN+ D A+ A VAAL D  +P    VED + V        +N  +   L +  K + CT A   ++I++DP+ EEE +  A +++ +    G +    K G   L+R  + +  ++A +    + + +DK+
Sbjct:   20 INNKERIDGRS-LHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDTPEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAE-VEDGEVV--------INREKMQPLPVNRKALMCTFAKIGNEIVLDPSLEEEDILTARISIGV-TEEGSICAMQKGGEGPLTRDDVLKAVSIAVEKVPQLIEYLDKS 268

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|259645406|sp|C3NHC2.1|RRP42_SULIN (RecName: Full=Exosome complex component Rrp42)

HSP 1 Score: 131.724 bits (330), Expect = 1.757e-35
Identity = 85/249 (34.14%), Postives = 134/249 (53.82%), Query Frame = 0

Query:   25 IENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDL--VHFHKPGGAALSRHKLQECTALAK 271
             E G+R DGR  LT+ RP+SI+      ADGSA+VK G T+V+ G KLE+  P+ + P+QG ++ NV+  PL +  F+PGPP E A   ++ +   L +S  +DL  L I+  K  W + +D+  L++ GNVLD    A VAAL +  + +V    ++D+    G +V  N     KL L    +  ++A  +  ++VDP  +EES+    V+    + T DL  V   K G  ++S   + +    A+
Sbjct:   23 FEKGTRQDGRK-LTDYRPLSITLNYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKV----EQDS---NGFRVNKNEVV-GKLPLNHPVVTVSIAKVDKYLIVDPDLDEESIMDTKVSF---SYTPDLKIVGIQKSGKGSMSLQDIDQAENTAR 259

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BLAST of exosome complex component rrp43 vs. SwissProt
Match: gi|259645402|sp|C3N5R4.1|RRP42_SULIA (RecName: Full=Exosome complex component Rrp42 >gi|259645405|sp|C3MVG5.1|RRP42_SULIM RecName: Full=Exosome complex component Rrp42)

HSP 1 Score: 131.339 bits (329), Expect = 2.856e-35
Identity = 85/249 (34.14%), Postives = 135/249 (54.22%), Query Frame = 0

Query:   25 IENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIMVDPTEEEESLAHAVVTVVLDAATGDL--VHFHKPGGAALSRHKLQECTALAK 271
             E G+R DGR  LT+ RP+SI+      ADGSA+VK G T+V+ G KLE+  P+ + P+QG ++ NV+  PL +  F+PGPP E A   ++ +   L +S  +DL  L I+  K  W + +D+  L++ GNVLD    A VAAL++  + +V    ++D+    G +V  N     KL L    +  ++A  +  ++VDP  +EES+    V+    + T DL  V   K G  ++S   + +    A+
Sbjct:   23 FEKGTRQDGRK-LTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALHNTKVYKV----EQDS---NGFRVNKNEVV-GKLPLNHPVVTVSIAKVDKYLIVDPDLDEESIMDTKVSF---SYTPDLKIVGIQKSGKGSMSLQDIDQAENTAR 259

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BLAST of exosome complex component rrp43 vs. nr
Match: gi|555989998|ref|XP_005906823.1| (PREDICTED: exosome complex component RRP43 [Bos mutus] >gi|742099895|ref|XP_010833933.1| PREDICTED: exosome complex component RRP43 [Bison bison bison] >gi|1131164261|ref|XP_019826945.1| PREDICTED: exosome complex component RRP43 [Bos indicus])

HSP 1 Score: 271.552 bits (693), Expect = 2.423e-87
Identity = 133/273 (48.72%), Postives = 186/273 (68.13%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGSA+VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS I+  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEE-GRLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

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BLAST of exosome complex component rrp43 vs. nr
Match: gi|118601810|ref|NP_001073074.1| (exosome complex component RRP43 [Bos taurus] >gi|122135904|sp|Q2KHU3.1|EXOS8_BOVIN RecName: Full=Exosome complex component RRP43; AltName: Full=Exosome component 8; AltName: Full=Ribosomal RNA-processing protein 43 >gi|86826533|gb|AAI12882.1| Exosome component 8 [Bos taurus] >gi|296481825|tpg|DAA23940.1| TPA: exosome complex exonuclease RRP43 [Bos taurus])

HSP 1 Score: 270.781 bits (691), Expect = 4.044e-87
Identity = 133/273 (48.72%), Postives = 186/273 (68.13%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGSA+VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS I+  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSCLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEE-GRLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|1246169406|ref|XP_022430409.1| (exosome complex component RRP43 [Delphinapterus leucas] >gi|1246169408|ref|XP_022430410.1| exosome complex component RRP43 [Delphinapterus leucas])

HSP 1 Score: 270.781 bits (691), Expect = 5.084e-87
Identity = 132/273 (48.35%), Postives = 188/273 (68.86%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++VK G T V+CG+K+E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS +V  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE+LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNIGSIGTADGSSLVKLGNTTVICGIKVEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQVVQKEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|466070326|ref|XP_004282280.1| (PREDICTED: exosome complex component RRP43 [Orcinus orca])

HSP 1 Score: 270.396 bits (690), Expect = 7.443e-87
Identity = 131/273 (47.99%), Postives = 187/273 (68.50%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS ++  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE+LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNIGSIGTADGSSLVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQVIQKEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ASAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|426236417|ref|XP_004012165.1| (PREDICTED: exosome complex component RRP43 isoform X1 [Ovis aries] >gi|548488226|ref|XP_005687555.1| PREDICTED: exosome complex component RRP43 [Capra hircus] >gi|556764979|ref|XP_005977756.1| PREDICTED: exosome complex component RRP43 [Pantholops hodgsonii] >gi|803316793|ref|XP_012016660.1| PREDICTED: exosome complex component RRP43 isoform X1 [Ovis aries musimon])

HSP 1 Score: 270.011 bits (689), Expect = 1.021e-86
Identity = 132/273 (48.35%), Postives = 186/273 (68.13%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS I+  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNVGSIGTADGSSLVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|594692861|ref|XP_007193718.1| (PREDICTED: exosome complex component RRP43 [Balaenoptera acutorostrata scammoni])

HSP 1 Score: 269.626 bits (688), Expect = 1.462e-86
Identity = 131/273 (47.99%), Postives = 187/273 (68.50%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS ++  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE+LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNIGSIGTADGSSLVKLGNTTVICGIKAEFGAPPTDAPDKGYIVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQVIQKEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|560912840|ref|XP_006182701.1| (PREDICTED: exosome complex component RRP43 [Camelus ferus] >gi|560975748|ref|XP_006210174.1| PREDICTED: exosome complex component RRP43 [Vicugna pacos] >gi|743712498|ref|XP_010949787.1| PREDICTED: exosome complex component RRP43 [Camelus bactrianus] >gi|744544103|ref|XP_010992184.1| PREDICTED: exosome complex component RRP43 [Camelus dromedarius])

HSP 1 Score: 269.626 bits (688), Expect = 1.511e-86
Identity = 132/273 (48.35%), Postives = 187/273 (68.50%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++V+ G T V+CG+K E   P A+ PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS I+  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNIGSIGTADGSSLVRLGNTTVICGIKAEFGAPPADAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVRLPEVTINEET-------ALAEVNFKKKSHLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|602708049|ref|XP_007464290.1| (PREDICTED: exosome complex component RRP43 [Lipotes vexillifer] >gi|1131208507|ref|XP_019792298.1| PREDICTED: exosome complex component RRP43 [Tursiops truncatus])

HSP 1 Score: 269.24 bits (687), Expect = 1.779e-86
Identity = 131/273 (47.99%), Postives = 187/273 (68.50%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS ++  +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE+LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNIGSIGTADGSSLVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQVIQKEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEE-GKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|850307897|ref|XP_004711301.2| (PREDICTED: exosome complex component RRP43 [Echinops telfairi])

HSP 1 Score: 269.24 bits (687), Expect = 2.260e-86
Identity = 132/273 (48.35%), Postives = 187/273 (68.50%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+I +ADGSA+VK G T V+CG+K E A P  + PD+G++VPNVD PPLC P+F+ GPP E AQVAS+FI +V+ NS I+  +DLCI + K +WVL+ DL+CL++DGN+LD    AL+AAL ++ LP+VTI E+        A  +VN  +RS L +R  P+A + AIF+D ++ VDPT EEE LA   +T+V+D   G L   HKPGG+ L+  KLQ+C + A   +K + KL+D+
Sbjct:   13 FKTVEPLEYYRRFLKENCRPDGR-ELGEFRTTTVNIGSITTADGSALVKLGNTTVICGIKAEFAAPPTDAPDKGYVVPNVDLPPLCSPRFRSGPPGEDAQVASQFIADVIENSQIIQKEDLCISQGKLAWVLYCDLLCLDYDGNILDACTFALLAALKNVQLPEVTISEET-------ALAKVNLKKRSHLNIRHYPVATSFAIFDDTLLIVDPTGEEEHLATGTLTIVMDEE-GKLCSLHKPGGSGLTGTKLQDCLSRAVTRHKEVKKLMDE 276

[Close]

BLAST of exosome complex component rrp43 vs. nr
Match: gi|1187529114|ref|XP_020747580.1| (exosome complex component RRP43 [Odocoileus virginianus texanus])

HSP 1 Score: 268.855 bits (686), Expect = 2.662e-86
Identity = 130/273 (47.62%), Postives = 187/273 (68.50%), Query Frame = 0

Query:   12 FKGIQPLEYFRHHIENGSRPDGRSNLTELRPVSISQGTIGSADGSAIVKQGQTIVVCGLKLELAPPHANDPDQGFMVPNVDFPPLCHPQFKPGPPPEPAQVASKFIHEVLTNSGIVDLKDLCIQESKYSWVLHMDLMCLNHDGNVLDCALKALVAALNDLGLPQVTIVEDEDAVVDAGAKVEVNTAQRSKLTLRSKPIACTMAIFEDQIM-VDPTEEEESLAHAVVTVVLDAATGDLVHFHKPGGAALSRHKLQECTALAKKHYKTIAKLIDK 283
            FK ++PLEY+R  ++   RPDGR  L E R  +++ G+IG+ADGS++VK G T V+CG+K E   P  + PD+G++VPNVD  PLC  +F+ GPP E AQVAS+FI +V+ NS I++ +DLCI   K +WVL+ DL+CLNHDGN+LD    AL+AAL ++ LP+VTI E+        A  EVN  ++S L +R+ P+A + A+F+D ++ VDPTEEEE LA   +TVV+D   G L   HKPGG+ L+  KLQ+C + A   ++ + +L+D+
Sbjct:    5 FKTVEPLEYYRRFLKENCRPDGRE-LGEFRTTTVNVGSIGTADGSSLVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIINKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEET-------ALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEE-GRLCCLHKPGGSGLTGSKLQDCMSRAVTRHREVKQLMDE 268

The following BLAST results are available for this feature:

BLAST of exosome complex component rrp43 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAG00000008750	1.707e-70	44.57	supercontig:LSalAtl2s:LSalAtl2s543:201996:206114:1...	[more]
EMLSAG00000000002	2.582e-16	32.37	supercontig:LSalAtl2s:LSalAtl2s1000:41727:44138:1 ...	[more]

BLAST of exosome complex component rrp43 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|122135904\|sp\|Q2KHU3.1\|EXOS8_BOVIN	1.305e-89	48.72	RecName: Full=Exosome complex component RRP43; Alt...	[more]
gi\|21759409\|sp\|Q96B26.1\|EXOS8_HUMAN	2.181e-87	47.62	RecName: Full=Exosome complex component RRP43; Alt...	[more]
gi\|21759414\|sp\|Q9D753.1\|EXOS8_MOUSE	5.720e-86	46.89	RecName: Full=Exosome complex component RRP43; Alt...	[more]
gi\|1723274\|sp\|Q10205.1\|RRP43_SCHPO	1.629e-63	37.59	RecName: Full=Exosome complex component rrp43; Alt...	[more]
gi\|29336820\|sp\|Q8TYC2.1\|RRP42_METKA	7.126e-44	32.68	RecName: Full=Exosome complex component Rrp42	[more]
gi\|29336897\|sp\|Q975G9.1\|RRP42_SULTO	9.991e-37	33.46	RecName: Full=Exosome complex component Rrp42	[more]
gi\|121687882\|sp\|Q0W2Y7.1\|RRP42_METAR	1.173e-36	31.27	RecName: Full=Exosome complex component Rrp42	[more]
gi\|29336572\|sp\|O26778.1\|RRP42_METTH	1.313e-36	32.31	RecName: Full=Exosome complex component Rrp42	[more]
gi\|259645406\|sp\|C3NHC2.1\|RRP42_SULIN	1.757e-35	34.14	RecName: Full=Exosome complex component Rrp42	[more]
gi\|259645402\|sp\|C3N5R4.1\|RRP42_SULIA	2.856e-35	34.14	RecName: Full=Exosome complex component Rrp42 >gi\|...	[more]

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BLAST of exosome complex component rrp43 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|555989998\|ref\|XP_005906823.1\|	2.423e-87	48.72	PREDICTED: exosome complex component RRP43 [Bos mu...	[more]
gi\|118601810\|ref\|NP_001073074.1\|	4.044e-87	48.72	exosome complex component RRP43 [Bos taurus] >gi\|1...	[more]
gi\|1246169406\|ref\|XP_022430409.1\|	5.084e-87	48.35	exosome complex component RRP43 [Delphinapterus le...	[more]
gi\|466070326\|ref\|XP_004282280.1\|	7.443e-87	47.99	PREDICTED: exosome complex component RRP43 [Orcinu...	[more]
gi\|426236417\|ref\|XP_004012165.1\|	1.021e-86	48.35	PREDICTED: exosome complex component RRP43 isoform...	[more]
gi\|594692861\|ref\|XP_007193718.1\|	1.462e-86	47.99	PREDICTED: exosome complex component RRP43 [Balaen...	[more]
gi\|560912840\|ref\|XP_006182701.1\|	1.511e-86	48.35	PREDICTED: exosome complex component RRP43 [Camelu...	[more]
gi\|602708049\|ref\|XP_007464290.1\|	1.779e-86	47.99	PREDICTED: exosome complex component RRP43 [Lipote...	[more]
gi\|850307897\|ref\|XP_004711301.2\|	2.260e-86	48.35	PREDICTED: exosome complex component RRP43 [Echino...	[more]
gi\|1187529114\|ref\|XP_020747580.1\|	2.662e-86	47.62	exosome complex component RRP43 [Odocoileus virgin...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold552_size138156	supercontig	scaffold552_size138156:111470..112434 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold552_size138156-snap-gene-0.29-mRNA-1	maker-scaffold552_size138156-snap-gene-0.29-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold552_size138156:111470..112434-

gene from alignment at scaffold552_size138156:111470..112434-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold552_size138156-snap-gene-0.29 ID=maker-scaffold552_size138156-snap-gene-0.29|Name=exosome complex component rrp43|organism=Tigriopus kingsejongensis|type=gene|length=965bp|location=Sequence derived from alignment at scaffold552_size138156:111470..112434- (Tigriopus kingsejongensis)
AGACTCAGCCCAAGATGACCGAGCTCCACAAGGCCACCGTCAAGGAGTTC
AAGGGCATCCAACCTCTCGAGTACTTTCGGCATCACATCGAGAACGGATC
CCGACCCGACGGTCGCTCTAACCTCACCGAGTTGAGGCCAGTGTCCATCT
CCCAAGGGACCATCGGGAGTGCCGACGGTTCGGCCATCGTCAAGCAAGGG
CAGACCATCGTGGTGTGTGGGCTCAAGCTGGAGCTGGCTCCCCCTCATGC
CAATGACCCCGACCAAGGTACGTATCAGGCTGACCAGTGCGAAGAGGCAT
TCTGGTTCCAAGTCCACTTGTGTGTTTCAGGCTTCATGGTGCCCAATGTG
GACTTTCCGCCCTTGTGCCACCCGCAGTTCAAGCCGGGCCCACCCCCGGA
GCCGGCTCAGGTGGCGAGCAAGTTCATCCACGAAGTGCTCACCAATTCCG
GCATCGTCGACCTCAAGGATCTCTGTATCCAAGAGAGCAAGTACTCTTGG
GTGCTCCACATGGATCTCATGTGCTTGAACCACGATGGCAACGTTTTGGA
CTGCGCCCTGAAGGCGCTCGTGGCCGCCTTGAACGACCTTGGCCTCCCCC
AGGTCACCATTGTGGAGGACGAGGACGCCGTGGTGGACGCCGGAGCCAAG
GTCGAGGTCAACACAGCCCAACGCAGCAAGCTTACGCTCCGATCCAAACC
CATTGCCTGTACCATGGCCATTTTCGAGGACCAAATCATGGTCGATCCCA
CCGAGGAGGAGGAATCTCTGGCCCATGCCGTGGTGACCGTGGTTCTGGAT
GCGGCCACGGGCGACCTCGTCCACTTCCACAAACCCGGGGGCGCCGCCCT
CTCCCGACACAAGCTCCAAGAGTGCACGGCCTTGGCCAAGAAGCATTACA
AGACCATTGCGAAGCTCATCGACAAGGCCGGATCCGTGAGCAAGATGAGC
TCGCGCAAGCCTTAA

Synonyms

The feature 'exosome complex component rrp43' has the following synonyms


Synonym
Tk00647

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