EMLSAG00000000498, EMLSAG00000000498-683264 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812917|gb|GAXK01141651.1| (TSA: Calanus finmarchicus comp191866_c0_seq8 transcribed RNA sequence) HSP 1 Score: 117.857 bits (294), Expect = 6.162e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1104 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1664
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812919|gb|GAXK01141649.1| (TSA: Calanus finmarchicus comp191866_c0_seq6 transcribed RNA sequence) HSP 1 Score: 117.857 bits (294), Expect = 7.158e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1104 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1664
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812918|gb|GAXK01141650.1| (TSA: Calanus finmarchicus comp191866_c0_seq7 transcribed RNA sequence) HSP 1 Score: 117.472 bits (293), Expect = 7.197e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1156 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1716
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812921|gb|GAXK01141647.1| (TSA: Calanus finmarchicus comp191866_c0_seq4 transcribed RNA sequence) HSP 1 Score: 117.857 bits (294), Expect = 8.084e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1104 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1664
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812920|gb|GAXK01141648.1| (TSA: Calanus finmarchicus comp191866_c0_seq5 transcribed RNA sequence) HSP 1 Score: 117.472 bits (293), Expect = 8.214e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1156 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1716
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812922|gb|GAXK01141646.1| (TSA: Calanus finmarchicus comp191866_c0_seq3 transcribed RNA sequence) HSP 1 Score: 117.472 bits (293), Expect = 9.178e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1156 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1716
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812923|gb|GAXK01141645.1| (TSA: Calanus finmarchicus comp191866_c0_seq2 transcribed RNA sequence) HSP 1 Score: 117.857 bits (294), Expect = 9.423e-29 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1104 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1664
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592812924|gb|GAXK01141644.1| (TSA: Calanus finmarchicus comp191866_c0_seq1 transcribed RNA sequence) HSP 1 Score: 117.472 bits (293), Expect = 1.062e-28 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSN--VKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 +I ++SC Y Y+ LTC C + N LN++ + + ++ V+ V+I+ C L I LD + P FK+ RV +I FDP + Q L +DF + + G+ V E ++I+ T +K+ +S+F H+P G TI L + DS F + P I V+ K V+V+ NQ INA+QV Sbjct: 1156 MIQRQSCYYVPYSKQLTCQCTGEDTNTFLNLRLMFFIKEKGQEVRSVMIESCLNLLIGLDLTGVNPTKIPFKFKNCGRVSFDSIHFDPRFAGSQLLSIDFERVNSVMMEGLDVEEAVQISTTKVKELIIHQSNFTHLPLPGLTISQTDKLSITDSLFTRISPGSISVKSAKEVVVVNNQFNINAIQV 1716
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592908689|gb|GAXK01049686.1| (TSA: Calanus finmarchicus comp1089718_c0_seq1 transcribed RNA sequence) HSP 1 Score: 98.9821 bits (245), Expect = 1.906e-23 Identity = 52/184 (28.26%), Postives = 91/184 (49.46%), Query Frame = 0 Query: 45 QRSCSYSSYNGHLTCACDSIEMNVTLNIQFINY--TRDSNVKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 Q+SC Y +N L C C E L+++ + + +++ C L + LD + ++ K+I+ + I ++ FD Y+ RQ L + F ++ + + + E +++ TN+K+ S F HIP G + L++KDS F V P+ +++E TK V VM NQ A+QV Sbjct: 209 QQSCYYQPHNKELVCQCREGEDKSYLHLRLREFIIQAGQEITSILLHSCPDLLLHLDCLGVNPTQIQMMVKNIQTIRIESVTFDRKYQGRQRLRMAFEHVGSATISSARIEEAVEMAVTNVKEFLISNSTFGHIPIRGLRVSRTDKLVIKDSTFTRVYPKSVVLEKTKVVQVMNNQFSAEAIQV 760
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Match: gi|592838844|gb|GAXK01118700.1| (TSA: Calanus finmarchicus comp1090158_c0_seq2 transcribed RNA sequence) HSP 1 Score: 97.0561 bits (240), Expect = 4.258e-22 Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 0 Query: 42 LIPQRSCSYSSYNGHLTCACDSIEMNVT-LNIQFINYTRD--SNVKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQV 226 L ++C Y ++ HL C C + + L+I+ + + R+ V+ V I C L + LD + + P F RV + I FD + Q+L F NIE+ F G+ V+E I+I N+K S F H+P + TI+ +++KD F + + ++ TK V V+ N++ INA++ Sbjct: 813 LAQHQACYYQPFHKHLACQCGQEGSHASYLSIKMMYWVREMGQEVRSVKIHSCQDLLVGLDLTGINPSTVPFTFIHSSRVTVDFITFDKSFAGNQKLVTQFRNIESVSFQGLHVDEAIEIGIENVKYFLLESSTFSHLPPNSVTIERTSKVIIKDCIFLRLSSGSVKIKKTKQVEVINNELSINAIKA 1376
BLAST of EMLSAG00000000498 vs. L. salmonis peptides
Match: EMLSAP00000000498 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1078:196550:201256:1 gene:EMLSAG00000000498 transcript:EMLSAT00000000498 description:"augustus_masked-LSalAtl2s1078-processed-gene-1.2") HSP 1 Score: 489.96 bits (1260), Expect = 2.930e-177 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 Query: 1 MSIHHPNQFNMKIIGIYLLLTLLHGSQGATNGTEEQDSFSQLIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSNVKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQVRIVSFWIYSDF 237 MSIHHPNQFNMKIIGIYLLLTLLHGSQGATNGTEEQDSFSQLIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSNVKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQVRIVSFWIYSDF Sbjct: 1 MSIHHPNQFNMKIIGIYLLLTLLHGSQGATNGTEEQDSFSQLIPQRSCSYSSYNGHLTCACDSIEMNVTLNIQFINYTRDSNVKKVIIKQCNRLHISLDFRKLQAGSFPIIFKSIRRVEIRNIIFDPMYKNRQELELDFNNIETFEFNGIFVNETIKINATNIKDAHFIKSHFEHIPTHGFTIKNAKDLLVKDSYFRHVEPRFILVEDTKSVLVMGNQMPINAVQVRIVSFWIYSDF 237 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000498 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000498 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 21
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BLAST of EMLSAG00000000498 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000498 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000498 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000498 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000498 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1078:196550..201256+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000498-683264 ID=EMLSAG00000000498-683264|Name=EMLSAG00000000498|organism=Lepeophtheirus salmonis|type=gene|length=4707bp|location=Sequence derived from alignment at LSalAtl2s1078:196550..201256+ (Lepeophtheirus salmonis)back to top Add to Basket
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