EMLSAG00000001681, EMLSAG00000001681-684447 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592830001|gb|GAXK01127543.1| (TSA: Calanus finmarchicus comp170775_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 1.501e-7 Identity = 21/55 (38.18%), Postives = 39/55 (70.91%), Query Frame = 0 Query: 90 EYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTSPDCENVDGSK 144 +YR+L +++P + K VSK ++EEAI YI++L +QL++ + +CEN++ +K Sbjct: 168 QYRKLIAVLPNICSKTKVSKQIVVEEAIIYIEALQKQLLNNLERQEECENLENNK 332
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592910883|gb|GAXK01047492.1| (TSA: Calanus finmarchicus comp75623_c0_seq9 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 7.906e-4 Identity = 17/43 (39.53%), Postives = 30/43 (69.77%), Query Frame = 0 Query: 89 MEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTI 131 ++ RL+ ++P+V K V+ +I+ EAI+YIDSL ++L+ I Sbjct: 201 VDLMRLKDLIPSVTAKDNVTHLDIILEAIRYIDSLQDKLVDKI 329
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592910882|gb|GAXK01047493.1| (TSA: Calanus finmarchicus comp75623_c0_seq10 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 7.984e-4 Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 0 Query: 89 MEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRT 133 ++ RL+ ++P+V K V+ +I+ EAI+YIDSL ++L I T Sbjct: 201 VDLMRLKDLIPSVTAKDNVTHLDIILEAIRYIDSLQDKLADKIDT 335
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592910885|gb|GAXK01047490.1| (TSA: Calanus finmarchicus comp75623_c0_seq7 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 1.218e-3 Identity = 17/39 (43.59%), Postives = 29/39 (74.36%), Query Frame = 0 Query: 93 RLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTI 131 RL+ ++P++A K V+ +I+ EAI+YIDSL ++L+ I Sbjct: 215 RLKDLIPSMAAKDNVTHLDIILEAIRYIDSLQDKLVDKI 331
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592910884|gb|GAXK01047491.1| (TSA: Calanus finmarchicus comp75623_c0_seq8 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 1.254e-3 Identity = 18/42 (42.86%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 93 RLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTS 134 RL+ ++P++A K V+ +I+ EAI+YIDSL ++L I T Sbjct: 215 RLKDLIPSMAAKDNVTHLDIILEAIRYIDSLQDKLADKIDTG 340
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592780418|gb|GAXK01174150.1| (TSA: Calanus finmarchicus comp230339_c0_seq5 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 2.985e-3 Identity = 16/43 (37.21%), Postives = 30/43 (69.77%), Query Frame = 0 Query: 90 EYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIR 132 + RRL+ ++P++A + V + +ILEE +YI SL ++L+ +R Sbjct: 190 QLRRLKEMIPSLAQQGAVDEVDILEETTRYILSLEQKLLEKVR 318
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592910886|gb|GAXK01047489.1| (TSA: Calanus finmarchicus comp75623_c0_seq6 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.186e-3 Identity = 16/43 (37.21%), Postives = 30/43 (69.77%), Query Frame = 0 Query: 89 MEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTI 131 ++ RL+ ++P++ K V+ +I+ EAI+YIDSL ++L+ I Sbjct: 219 VDLMRLKDLIPSMTAKDNVTHLDIILEAIRYIDSLQDKLVDKI 347
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592910887|gb|GAXK01047488.1| (TSA: Calanus finmarchicus comp75623_c0_seq5 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 3.575e-3 Identity = 17/46 (36.96%), Postives = 30/46 (65.22%), Query Frame = 0 Query: 89 MEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTS 134 ++ RL+ ++P++ K V+ +I+ EAI+YIDSL ++L I T Sbjct: 219 VDLMRLKDLIPSMTAKDNVTHLDIILEAIRYIDSLQDKLADKIDTG 356
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592780417|gb|GAXK01174151.1| (TSA: Calanus finmarchicus comp230339_c0_seq6 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 4.070e-3 Identity = 16/43 (37.21%), Postives = 30/43 (69.77%), Query Frame = 0 Query: 90 EYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIR 132 + RRL+ ++P++A + V + +ILEE +YI SL ++L+ +R Sbjct: 190 QLRRLKEMIPSLAQQGAVDEVDILEETTRYILSLEQKLLEKVR 318
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Match: gi|592758388|gb|GAXK01196025.1| (TSA: Calanus finmarchicus comp474161_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 4.536e-3 Identity = 18/39 (46.15%), Postives = 29/39 (74.36%), Query Frame = 0 Query: 89 MEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQL 127 +E RL+ +VP +A K V++ +I+ EAI+YIDSL ++L Sbjct: 188 LEILRLQKLVPTMAAKDNVTQLDIILEAIRYIDSLRDKL 304
BLAST of EMLSAG00000001681 vs. L. salmonis peptides
Match: EMLSAP00000001681 (pep:novel supercontig:LSalAtl2s:LSalAtl2s128:838618:857555:-1 gene:EMLSAG00000001681 transcript:EMLSAT00000001681 description:"maker-LSalAtl2s128-snap-gene-8.19") HSP 1 Score: 390.578 bits (1002), Expect = 2.079e-139 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 MCDLYESVLIHSWESKTMNSPRSPTLTAGPSSLCLLCSSSSTPCSCSSSPSTKQKDYKTPRRAIPRLPSLATLQGRRVAKKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTSPDCENVDGSKVIETVQSNLRPQLERRVSARRRLDALAVRNLISTSSSVKVLSPKDFKKKK 194 MCDLYESVLIHSWESKTMNSPRSPTLTAGPSSLCLLCSSSSTPCSCSSSPSTKQKDYKTPRRAIPRLPSLATLQGRRVAKKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTSPDCENVDGSKVIETVQSNLRPQLERRVSARRRLDALAVRNLISTSSSVKVLSPKDFKKKK Sbjct: 1 MCDLYESVLIHSWESKTMNSPRSPTLTAGPSSLCLLCSSSSTPCSCSSSPSTKQKDYKTPRRAIPRLPSLATLQGRRVAKKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTSPDCENVDGSKVIETVQSNLRPQLERRVSARRRLDALAVRNLISTSSSVKVLSPKDFKKKK 194
BLAST of EMLSAG00000001681 vs. L. salmonis peptides
Match: EMLSAP00000001142 (pep:novel supercontig:LSalAtl2s:LSalAtl2s118:541400:541962:-1 gene:EMLSAG00000001142 transcript:EMLSAT00000001142 description:"maker-LSalAtl2s118-augustus-gene-5.21") HSP 1 Score: 46.2098 bits (108), Expect = 5.231e-7 Identity = 23/77 (29.87%), Postives = 43/77 (55.84%), Query Frame = 0 Query: 51 STKQKDYKTPRRAIPRLPSLATLQGRRVAKKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQL 127 S +++ + + I L L K+ R + E++ L+S++P VA+K G+SK EI++ ++KYI+ L +L Sbjct: 14 SKREEKFNKRKSGIFDLNDFEELDEEDSGKRRRIQQIDREFKTLKSLIPDVANKSGISKLEIIDASVKYIEELRTKL 90
BLAST of EMLSAG00000001681 vs. Select Arthropod Genomes
Match: gb|KFM71937.1| (hypothetical protein X975_22685, partial [Stegodyphus mimosarum]) HSP 1 Score: 53.1434 bits (126), Expect = 4.988e-8 Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 0 Query: 90 EYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTS--PDC---ENVDGSKV 145 EY+RLR++VP++A K VSK ++EEAI+YID LH L++ +RT P C NVD +++ Sbjct: 79 EYQRLRNMVPSIATKPLVSKVTVIEEAIRYIDYLHGALLTRLRTKGLPSCLRGVNVDVNQL 139
BLAST of EMLSAG00000001681 vs. nr
Match: gi|926621027|ref|XP_013775832.1| (PREDICTED: uncharacterized protein LOC106460650 [Limulus polyphemus]) HSP 1 Score: 60.4622 bits (145), Expect = 2.867e-8 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0 Query: 74 QGRRVAKKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRT----------SPDCENVDGSKVIETVQS 151 Q RRV K +K + EYRRLRS+VP++A K V K ++EEAI+YID LH L++ +RT + D + D S++ E V + Sbjct: 40 QERRVHLKLQK---SHEYRRLRSMVPSIAKKAHVPKVTVIEEAIRYIDHLHNALLTRLRTRGLPLCLQGMNIDINSFDHSQIQELVHN 124
BLAST of EMLSAG00000001681 vs. nr
Match: gi|908422069|ref|XP_013072405.1| (PREDICTED: uncharacterized protein LOC106059365 [Biomphalaria glabrata] >gi|908422071|ref|XP_013072406.1| PREDICTED: uncharacterized protein LOC106059365 [Biomphalaria glabrata] >gi|908422073|ref|XP_013072408.1| PREDICTED: uncharacterized protein LOC106059365 [Biomphalaria glabrata] >gi|908422075|ref|XP_013072409.1| PREDICTED: uncharacterized protein LOC106059365 [Biomphalaria glabrata] >gi|908422077|ref|XP_013072410.1| PREDICTED: uncharacterized protein LOC106059365 [Biomphalaria glabrata] >gi|908422079|ref|XP_013072411.1| PREDICTED: uncharacterized protein LOC106059365 [Biomphalaria glabrata]) HSP 1 Score: 57.7658 bits (138), Expect = 1.966e-7 Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 68 PSLATLQGRRVAKKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTIRTSPDCENVDGSKVIETV 149 S A + RR + Y + R EY +LR++VP+VA K+ V+K +++EEA++YI+ LHE L+ R + D ++ ETV Sbjct: 12 ASAAQVVARRQVRMYLRKIREKEYSKLRALVPSVATKKKVTKVQVIEEAVRYIEKLHEALLERFRETHGSMAEDKAQ--ETV 91
BLAST of EMLSAG00000001681 vs. nr
Match: gi|443723975|gb|ELU12193.1| (hypothetical protein CAPTEDRAFT_225014 [Capitella teleta]) HSP 1 Score: 58.151 bits (139), Expect = 6.043e-7 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 71 ATLQGRR-VAKKYRKYA----RNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQL 127 A +GRR +A+KYRK + EY +LR+IVP+VA K VSK ++EEAIKYID LH+ L Sbjct: 99 AAGEGRRLIARKYRKAQLKKIQRREYLKLRAIVPSVAAKERVSKVTVIEEAIKYIDELHQAL 160
BLAST of EMLSAG00000001681 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold619_size123246-processed-gene-0.28 (protein:Tk05506 transcript:snap_masked-scaffold619_size123246-processed-gene-0.28-mRNA-1 annotation:"transcription factor partial") HSP 1 Score: 53.5286 bits (127), Expect = 4.182e-9 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0 Query: 80 KKYRKYARNMEYRRLRSIVPAVAHKRGVSKGEILEEAIKYIDSLHEQLISTI 131 KK +K+ + EY RL+ +VPA+ + +SK EI+EE I+YID+LH QL S I Sbjct: 97 KKSKKFQK--EYGRLKHLVPALTEREDLSKVEIVEETIRYIDALHHQLASRI 146 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001681 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001681 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 24
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BLAST of EMLSAG00000001681 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000001681 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001681 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000001681 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 3
BLAST of EMLSAG00000001681 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s128:838618..857555- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001681-684447 ID=EMLSAG00000001681-684447|Name=EMLSAG00000001681|organism=Lepeophtheirus salmonis|type=gene|length=18938bp|location=Sequence derived from alignment at LSalAtl2s128:838618..857555- (Lepeophtheirus salmonis)back to top Add to Basket
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