EMLSAG00000002679, EMLSAG00000002679-685445 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002679
Unique NameEMLSAG00000002679-685445
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000002679 vs. GO
Match: - (symbol:CG12200 species:7227 "Drosophila melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF14634 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG122049 EMBL:AY051777 UniGene:Dm.220 STRING:7227.FBpp0074479 PRIDE:Q7K4P2 FlyBase:FBgn0031018 InParanoid:Q7K4P2 OrthoDB:EOG7QC7XB Bgee:Q7K4P2 Uniprot:Q7K4P2)

HSP 1 Score: 55.0694 bits (131), Expect = 8.114e-9
Identity = 29/91 (31.87%), Postives = 47/91 (51.65%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCF----ISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ 93
            M  VHCNKC    + +P  +PFH+T C H++CG C     +   C +C      +++ I++DMP  +   F D +   Q   K ++F+  Q
Sbjct:   14 MFRVHCNKCFRHRKTDP-AVPFHLTQCRHVICGPCLGQSSLEKNCPLC--GQVLKAIQINRDMPTSVANYFADPLRFQQIYRKISKFQADQ 101
[Close]
BLAST of EMLSAG00000002679 vs. GO
Match: - (symbol:CG31053 species:7227 "Drosophila melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF14634 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG122049 OrthoDB:EOG7QC7XB EMBL:BT029068 RefSeq:NP_733236.1 UniGene:Dm.31349 SMR:Q8IMM9 IntAct:Q8IMM9 MINT:MINT-754741 STRING:7227.FBpp0084637 EnsemblMetazoa:FBtr0085268 GeneID:318572 KEGG:dme:Dmel_CG31053 UCSC:CG31053-RA FlyBase:FBgn0051053 GeneTree:ENSGT00590000083902 InParanoid:Q8IMM9 OMA:SDNLHFW GenomeRNAi:318572 NextBio:845473 Uniprot:Q8IMM9)

HSP 1 Score: 52.373 bits (124), Expect = 9.493e-8
Identity = 29/88 (32.95%), Postives = 45/88 (51.14%), Query Frame = 0 
Query:   10 VHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCF----ISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ 93
            +HCNKC  +    P  I FHMT C H++C SC        +C +C      R++ IDK++P  +   F+D +   Q   K ++F+  Q
Sbjct:    4 IHCNKCFRRRNVEPTLI-FHMTQCQHVLCASCLSESSTDKKCPLCKR--DLRAIPIDKNLPPNVAQYFEDPLRFQQLYRKISKFQADQ 88
[Close]
BLAST of EMLSAG00000002679 vs. GO
Match: - (symbol:si:ch211-10e2.1 "si:ch211-10e2.1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF14634 SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070912-9 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG122049 OrthoDB:EOG776SRM TreeFam:TF339477 GeneTree:ENSGT00740000115581 EMBL:AL928674 STRING:7955.ENSDARP00000099299 Ensembl:ENSDART00000145808 OMA:SSCGHIF Uniprot:B0R0H6)

HSP 1 Score: 48.521 bits (114), Expect = 2.151e-6
Identity = 31/95 (32.63%), Postives = 54/95 (56.84%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQS----IFKTAQFRKSQWKRL 97
            M+W HCN C +  R   K   F +++C HI C +C  S++CR+C +S ++  + I + M  Q +  F+D +  +Q+    I + A F+K Q +R+
Sbjct:    1 MNWFHCNNCFV--REGKK---FAVSSCGHIFCENCVNSSQCRVCHASCNY--LHISEQMKPQEKMFFKDPVKLVQTRLEHIAQIAIFQKRQKERV 88
[Close]
BLAST of EMLSAG00000002679 vs. GO
Match: - (symbol:C14orf164 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF14634 SMART:SM00184 Prosite:PS00518 GO:GO:0008270 InterPro:IPR017907 OMA:YQQRQMG OrthoDB:EOG776SRM TreeFam:TF319600 GeneTree:ENSGT00740000115581 EMBL:DAAA02028043 RefSeq:XP_005193680.1 RefSeq:XP_005193681.1 RefSeq:XP_005211499.1 RefSeq:XP_005211500.1 Ensembl:ENSBTAT00000036401 GeneID:101905955 KEGG:bta:101905955 CTD:101905955 Uniprot:E1BHB7)

HSP 1 Score: 45.4394 bits (106), Expect = 3.560e-5
Identity = 22/71 (30.99%), Postives = 38/71 (53.52%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQI 77
            MDW HCN+C   FR +     F +TNC HI C  C I  +C +C ++  +  + +  ++  Q +  F++ +
Sbjct:    1 MDWFHCNRC---FRKD--GAHFFVTNCGHIFCKKCVILEKCAVCGTACKY--LALSDNLKPQEKMYFRNPV 64
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592875615|gb|GAXK01081962.1| (TSA: Calanus finmarchicus comp112045_c4_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 2.322e-3
Identity = 21/66 (31.82%), Postives = 35/66 (53.03%), Query Frame = 0 
Query:   10 VHCNKCSLQFRANPKCIPFHMTNC----MHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRF 71
            V C KC+L+F + P+ +  + T+     +     SCF+ NRC++C       S+L +KD  A + F
Sbjct: 2774 VGCKKCTLRFSSTPQLLKHYSTSHFFSQLKSKIASCFVKNRCKLCG-----HSLLGEKDKVAHLGF 2956
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592930791|gb|GAXK01027762.1| (TSA: Calanus finmarchicus comp247384_c1_seq17 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 4.005e-2
Identity = 29/126 (23.02%), Postives = 53/126 (42.06%), Query Frame = 0 
Query:   12 CNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISN-------------RCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGIL 124
            C KCS  F A+P  +P  + +C+H +C SC  S+             +C++  + D    +L D+ +              L S+    + R  +W+R+ + L   +P         +K+GK  +L
Sbjct:   56 CPKCSTVFTAHPTSLPLILPSCLHHLCYSCVTSSTQSQAGAVQCCDPQCQVVLTRDDVHYLLPDRHL--------------LGSLAIQHKKRNDKWERMCDDLAQFIP-------PASKLGKTPML 370
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592930796|gb|GAXK01027757.1| (TSA: Calanus finmarchicus comp247384_c1_seq12 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 4.128e-2
Identity = 29/126 (23.02%), Postives = 53/126 (42.06%), Query Frame = 0 
Query:   12 CNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISN-------------RCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGIL 124
            C KCS  F A+P  +P  + +C+H +C SC  S+             +C++  + D    +L D+ +              L S+    + R  +W+R+ + L   +P         +K+GK  +L
Sbjct:   56 CPKCSTVFTAHPTSLPLILPSCLHHLCYSCVTSSTQSQAGAVQCCDPQCQVVLTRDDVHYLLPDRHL--------------LGSLAIQHKKRNDKWERMCDDLAQFIP-------PASKLGKTPML 370
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592904599|gb|GAXK01053776.1| (TSA: Calanus finmarchicus comp258115_c10_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 4.259e-1
Identity = 24/97 (24.74%), Postives = 42/97 (43.30%), Query Frame = 0 
Query:    3 TAYDMDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNR---CRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKR 96
            T   + W+ CN+CS +F          M++C  I C  C  ++    C  C ++   + + I K +P Q+  +F      L  I K + F+   + R
Sbjct:   55 TQSHLYWLSCNRCSTRFLPPQTSKKMFMSSCGCIYCTRCVQASTQSGCVTCRAAPG-KVLPIGKTLPQQVMEMFNRNEESLTKINKRSSFQTLHFNR 342
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592950856|gb|GAXK01007697.1| (TSA: Calanus finmarchicus comp492466_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 5.036e-1
Identity = 20/66 (30.30%), Postives = 31/66 (46.97%), Query Frame = 0 
Query:   10 VHCNKCSLQFRANPKCI----PFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRF 71
            V C KCSL+F + P+ +     FH    +     SCF + +C++C       +V  DKD    + F
Sbjct:  215 VGCEKCSLRFSSTPQLLKHYSSFHFFAELKAKIPSCFKNAKCKLCG-----HTVSSDKDKIVHLGF 397
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592834567|gb|GAXK01122977.1| (TSA: Calanus finmarchicus comp1954161_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 1.209e+0
Identity = 12/35 (34.29%), Postives = 18/35 (51.43%), Query Frame = 0 
Query:    8 DWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCF 42
            D++ C  C L+F  N + +  H+T C    C  CF
Sbjct:  933 DYIECGLCELRFE-NLEVLEIHLTTCEIYECADCF 1034
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592897767|gb|GAXK01060608.1| (TSA: Calanus finmarchicus comp1742447_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.820e+0
Identity = 25/91 (27.47%), Postives = 39/91 (42.86%), Query Frame = 0 
Query:   41 CFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGILEGKEAPK 131
             FI++  R  D + S      D    A++    Q+Q   LQ           +W+ LFNS KC++  L  +N       +  +LEG E+ K
Sbjct:  151 IFINDIDRAVDVTSSVLLKFADDTKVARV-VESQEQQAELQKTIDRLVEWSGEWQMLFNSDKCHILHLGPRNARFEYTMEGRVLEGVESEK 420
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592897768|gb|GAXK01060607.1| (TSA: Calanus finmarchicus comp1742447_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.820e+0
Identity = 25/91 (27.47%), Postives = 39/91 (42.86%), Query Frame = 0 
Query:   41 CFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGILEGKEAPK 131
             FI++  R  D + S      D    A++    Q+Q   LQ           +W+ LFNS KC++  L  +N       +  +LEG E+ K
Sbjct:  401 IFINDIDRAVDVTSSVLLKFADDTKVARV-VESQEQQAELQKTIDRLVEWSGEWQMLFNSDKCHILHLGPRNARFEYTMEGRVLEGVESEK 670
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592798331|gb|GAXK01156237.1| (TSA: Calanus finmarchicus comp4668244_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 3.883e+0
Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 0 
Query:   25 CIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRS 58
            C+ F +  C+H+   +CF S+   + D+S+ FRS
Sbjct:   35 CLLFQLVQCIHLFKSTCFYSS-VNLTDASNKFRS 133
[Close]
BLAST of EMLSAG00000002679 vs. C. finmarchicus
Match: gi|592890859|gb|GAXK01067516.1| (TSA: Calanus finmarchicus comp16151_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 6.624e+0
Identity = 13/47 (27.66%), Postives = 24/47 (51.06%), Query Frame = 0 
Query:   10 VHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSF 56
            +HC +  + F+ +   IP  + + +H +C    + +RC  CDS   F
Sbjct:  914 IHCLESGVFFQHSLSVIPQLLDHYLHFICLGFLLVSRCLCCDSVFQF 1054
[Close]
BLAST of EMLSAG00000002679 vs. L. salmonis peptides
Match: EMLSAP00000002679 (pep:novel supercontig:LSalAtl2s:LSalAtl2s154:575158:577565:1 gene:EMLSAG00000002679 transcript:EMLSAT00000002679 description:"maker-LSalAtl2s154-snap-gene-5.13")

HSP 1 Score: 281.567 bits (719), Expect = 2.155e-98
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 
Query:    1 MKTAYDMDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGILEGKEAPKSSYN 135
            MKTAYDMDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGILEGKEAPKSSYN
Sbjct:    1 MKTAYDMDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGILEGKEAPKSSYN 135
[Close]
BLAST of EMLSAG00000002679 vs. Select Arthropod Genomes
Match: AAF48955.1 (uncharacterized protein Dmel_CG12200 [Drosophila melanogaster])

HSP 1 Score: 55.0694 bits (131), Expect = 3.127e-9
Identity = 29/91 (31.87%), Postives = 47/91 (51.65%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCF----ISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ 93
            M  VHCNKC    + +P  +PFH+T C H++CG C     +   C +C      +++ I++DMP  +   F D +   Q   K ++F+  Q
Sbjct:    1 MFRVHCNKCFRHRKTDP-AVPFHLTQCRHVICGPCLGQSSLEKNCPLC--GQVLKAIQINRDMPTSVANYFADPLRFQQIYRKISKFQADQ 88
[Close]
BLAST of EMLSAG00000002679 vs. Select Arthropod Genomes
Match: EEB15630.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 54.6842 bits (130), Expect = 7.737e-9
Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCF---ISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLF 98
            MDWVHCN C +Q       + F +TNC HI C +C     S +C +C     + S+ +  +M +++   F D +  L+   K  +F+++   RL 
Sbjct:    1 MDWVHCNNCYVQ--PGELEVKFFITNCGHIYCDNCLKLNTSEKCIVCQV--KYASLPLSSNMNSEIEIYFHDPVISLKKQIKILEFQQNHRIRLL 91
[Close]
BLAST of EMLSAG00000002679 vs. Select Arthropod Genomes
Match: AAN14131.1 (uncharacterized protein Dmel_CG31053 [Drosophila melanogaster])

HSP 1 Score: 52.373 bits (124), Expect = 3.632e-8
Identity = 29/88 (32.95%), Postives = 45/88 (51.14%), Query Frame = 0 
Query:   10 VHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCF----ISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ 93
            +HCNKC  +    P  I FHMT C H++C SC        +C +C      R++ IDK++P  +   F+D +   Q   K ++F+  Q
Sbjct:    4 IHCNKCFRRRNVEPTLI-FHMTQCQHVLCASCLSESSTDKKCPLCKR--DLRAIPIDKNLPPNVAQYFEDPLRFQQLYRKISKFQADQ 88
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|1101385976|ref|XP_018908847.1| (PREDICTED: probable E3 SUMO-protein ligase RNF212, partial [Bemisia tabaci])

HSP 1 Score: 60.4622 bits (145), Expect = 3.404e-9
Identity = 30/91 (32.97%), Postives = 53/91 (58.24%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMR-FVFQDQIPPLQSIFKTAQFRKSQWKR 96
            M+ +HCNKC + F    K   F++TNC H++C  C  S+ C IC   +    +LI ++MP+ ++  +F+D +  +  ++K  QFR   +K+
Sbjct:    1 MNVIHCNKCGI-FPEAKKSTKFYITNCGHLLCERCKGSDTCCIC--RNQCNKLLISEEMPSHVKDMLFEDLMDQMDHVYKILQFRTDHYKK 88
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|1058033847|gb|JAS20585.1| (hypothetical protein g.12659 [Clastoptera arizonana])

HSP 1 Score: 59.6918 bits (143), Expect = 5.600e-9
Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFIS--NRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLK 102
            MDWVHCN C +Q    PK   F++T+C HI C  C  +  N C++C +  +    LI+  MP ++   FQD       + K  +F+K    RL  +L+
Sbjct:    1 MDWVHCNTCYIQPGGTPK-TNFNVTSCGHIFCVICEPNEINNCKVCKNKCTM--TLINSQMPKEVSEYFQDSHAMFNKVLKIMEFQKGHRLRLCETLR 95
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|198451134|ref|XP_001358256.2| (uncharacterized protein Dpse_GA15968 [Drosophila pseudoobscura pseudoobscura] >gi|198131350|gb|EAL27394.2| uncharacterized protein Dpse_GA15968 [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 59.6918 bits (143), Expect = 3.934e-8
Identity = 45/139 (32.37%), Postives = 64/139 (46.04%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFI----SNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ--------WKRL--FNSLKCNLPILIKKNQNL---TKIGKEGILEGKE 128
            M  VHCNKCS +    P  IPF +T C HI+CG C        +C +C+     +++ I +DMP  +   FQD    LQ   K ++F+  Q        W+R      L+  L    K    L   TK+ K+ I E +E
Sbjct:    1 MFRVHCNKCSRRRDVEP-TIPFQLTRCHHIICGPCLTVCAAEKKCPMCE--HPLQTIAISRDMPIGVANYFQDPTKFLQLYRKISKFQSEQRSSDNLHFWRREQKHEELQLKLNGYTKMEAQLNQQTKVEKKRIAELRE 136
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|195143977|ref|XP_002012973.1| (GL23882 [Drosophila persimilis] >gi|194101916|gb|EDW23959.1| GL23882 [Drosophila persimilis])

HSP 1 Score: 59.6918 bits (143), Expect = 3.934e-8
Identity = 45/139 (32.37%), Postives = 64/139 (46.04%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFI----SNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ--------WKR--LFNSLKCNLPILIKKNQNL---TKIGKEGILEGKE 128
            M  VHCNKCS +    P  IPF +T C HI+CG C        +C +C+     +++ I +DMP  +   FQD    LQ   K ++F+  Q        W+R      L+  L    K    L   TK+ K+ I E +E
Sbjct:    1 MFRVHCNKCSRRRDVEP-TIPFQLTRCHHIICGPCLTVCAAEKKCPMCE--HPLQTIAISRDMPIGVANYFQDPTKFLQLYRKISKFQSEQRSSDNLHFWRREQQHEELQLKLNGYTKMEAQLNQQTKVEKKRIAELRE 136
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|1037050757|ref|XP_017141210.1| (PREDICTED: RING finger protein 212B [Drosophila miranda])

HSP 1 Score: 58.9214 bits (141), Expect = 6.886e-8
Identity = 45/139 (32.37%), Postives = 64/139 (46.04%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFI----SNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQ--------WKR--LFNSLKCNLPILIKKNQNL---TKIGKEGILEGKE 128
            M  VHCNKCS +    P  IPF +T C HI+CG C        +C +C+     +++ I +DMP  +   FQD    LQ   K ++F+  Q        W+R      L+  L    K    L   TK+ K+ I E +E
Sbjct:    1 MFRVHCNKCSRRRDVEP-TIPFQLTRCHHILCGPCLTVCAAEKKCPMCE--HPLQTIAISRDMPIGVANYFQDPTKFLQLYRKISKFQSEQRSSDNLHFWRREQQHEELQLKLNGYTKMEAQLNQQTKVEKKRIAELRE 136
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|1058048677|gb|JAS28000.1| (hypothetical protein g.12658 [Clastoptera arizonana])

HSP 1 Score: 59.3066 bits (142), Expect = 7.022e-8
Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFIS--NRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQSIFKTAQFRKSQWKRLFNSLK 102
            MDWVHCN C +Q    PK   F++T+C HI C  C  +  N C++C +  +    LI+  MP ++   FQD       + K  +F+K    RL  +L+
Sbjct:    1 MDWVHCNTCYIQPGGTPK-TNFNVTSCGHIFCVICEPNEINNCKVCKNKCTM--TLINSQMPKEVSEYFQDSHAMFNKVLKIMEFQKGHRLRLCETLR 95
[Close]
BLAST of EMLSAG00000002679 vs. nr
Match: gi|657811269|ref|XP_008332974.1| (PREDICTED: RING finger protein 212B [Cynoglossus semilaevis])

HSP 1 Score: 56.6102 bits (135), Expect = 2.736e-7
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 0 
Query:    7 MDWVHCNKCSLQFRANPKCIPFHMTNCMHIVCGSCFISNRCRICDSSDSFRSVLIDKDMPAQMRFVFQDQIPPLQS----IFKTAQFRKSQWKRLFNSLKCNLPILIKKNQNLTKIGKEGILE 125
            MDW HC+KC  +  ++     F +T+C HI C +C ISN C +C +S  +  + I  +M  Q +  F++ +  +QS    I + A F++ Q +R+   L+     L ++ + LT  G   + E
Sbjct:    1 MDWFHCSKCFTKRGSS-----FAVTSCGHICCEACIISNECSVCGASCCY--LTISDEMKPQEKVFFKEPLKLMQSRLEHISQIAVFQQKQMERIIIHLRHMTVELERRLKELTDKGYRQLSE 116
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002679 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4
Match NameE-valueIdentityDescription
-8.114e-931.87symbol:CG12200 species:7227 "Drosophila melanogast... [more]
-9.493e-832.95symbol:CG31053 species:7227 "Drosophila melanogast... [more]
-2.151e-632.63symbol:si:ch211-10e2.1 "si:ch211-10e2.1" species:7... [more]
-3.560e-530.99symbol:C14orf164 "Uncharacterized protein" species... [more]
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BLAST of EMLSAG00000002679 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 12
Match NameE-valueIdentityDescription
gi|592875615|gb|GAXK01081962.1|2.322e-331.82TSA: Calanus finmarchicus comp112045_c4_seq1 trans... [more]
gi|592930791|gb|GAXK01027762.1|4.005e-223.02TSA: Calanus finmarchicus comp247384_c1_seq17 tran... [more]
gi|592930796|gb|GAXK01027757.1|4.128e-223.02TSA: Calanus finmarchicus comp247384_c1_seq12 tran... [more]
gi|592904599|gb|GAXK01053776.1|4.259e-124.74TSA: Calanus finmarchicus comp258115_c10_seq1 tran... [more]
gi|592950856|gb|GAXK01007697.1|5.036e-130.30TSA: Calanus finmarchicus comp492466_c0_seq1 trans... [more]
gi|592834567|gb|GAXK01122977.1|1.209e+034.29TSA: Calanus finmarchicus comp1954161_c0_seq1 tran... [more]
gi|592897767|gb|GAXK01060608.1|1.820e+027.47TSA: Calanus finmarchicus comp1742447_c0_seq6 tran... [more]
gi|592897768|gb|GAXK01060607.1|1.820e+027.47TSA: Calanus finmarchicus comp1742447_c0_seq5 tran... [more]
gi|592798331|gb|GAXK01156237.1|3.883e+035.29TSA: Calanus finmarchicus comp4668244_c0_seq1 tran... [more]
gi|592890859|gb|GAXK01067516.1|6.624e+027.66TSA: Calanus finmarchicus comp16151_c1_seq1 transc... [more]

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BLAST of EMLSAG00000002679 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000026792.155e-98100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s154:57515... [more]
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BLAST of EMLSAG00000002679 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002679 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3
Match NameE-valueIdentityDescription
AAF48955.13.127e-931.87uncharacterized protein Dmel_CG12200 [Drosophila m... [more]
EEB15630.17.737e-930.53conserved hypothetical protein [Pediculus humanus ... [more]
AAN14131.13.632e-832.95uncharacterized protein Dmel_CG31053 [Drosophila m... [more]
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BLAST of EMLSAG00000002679 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 7
Match NameE-valueIdentityDescription
gi|1101385976|ref|XP_018908847.1|3.404e-932.97PREDICTED: probable E3 SUMO-protein ligase RNF212,... [more]
gi|1058033847|gb|JAS20585.1|5.600e-934.69hypothetical protein g.12659 [Clastoptera arizonan... [more]
gi|198451134|ref|XP_001358256.2|3.934e-832.37uncharacterized protein Dpse_GA15968 [Drosophila p... [more]
gi|195143977|ref|XP_002012973.1|3.934e-832.37GL23882 [Drosophila persimilis] >gi|194101916|gb|E... [more]
gi|1037050757|ref|XP_017141210.1|6.886e-832.37PREDICTED: RING finger protein 212B [Drosophila mi... [more]
gi|1058048677|gb|JAS28000.1|7.022e-834.69hypothetical protein g.12658 [Clastoptera arizonan... [more]
gi|657811269|ref|XP_008332974.1|2.736e-730.08PREDICTED: RING finger protein 212B [Cynoglossus s... [more]
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BLAST of EMLSAG00000002679 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s154supercontigLSalAtl2s154:575158..577565 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s154-snap-gene-5.13
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002679 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002679EMLSAT00000002679-698526Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s154:575158..577565+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002679-685445 ID=EMLSAG00000002679-685445|Name=EMLSAG00000002679|organism=Lepeophtheirus salmonis|type=gene|length=2408bp|location=Sequence derived from alignment at LSalAtl2s154:575158..577565+ (Lepeophtheirus salmonis)
CAACTTTTTCTTCCCAATGCATACTTTACCTTCTTAATTCAGTTGAAAGG
ATGAATTCATGAAGACTGCGTAGTAAGTAATAAAATAATATACAACGCTC
CTAGCGGACTAAAAAAGTTTTGCTACGATCAATACCTTGTTGAAATTATA
AACACGTGCACTTTGATTCGTTACTTTATTTTACATCTTAATCTCGGCCA
TACCACCATTCAAACATACCATACATCATAAAAACCACTTCGTTCCGAGT
CAATGTTATCTTTCTCTCTCTCCCGGTTCATTTCTTCTTCTTCATATTGT
GTTTTTTGCGCATTCCGTTAATAAGTGAGAAAGTTCGAACAAGGTCTTGT
AGTCAGACGTCCGGGGGCCGTCAACGCCCACTCAGGATAGCAAACAGTAG
CAAATACTAATGCTCCCTTCACGACCTGTTTTCGATTTATTGATAGGATG
ACTATCATGTTCTAATGAGATCATCCGACCTATTTAAAAATAACTATGTG
ATAAGGATTAAGAGTCATATGTACTAGTCTATTATTATAATATTAAAACA
AAATGACAATGGCTTCATTTCTTGGCTTAAGCAGTAATTTTTTATTAATC
ACCTATCATCAATTTTTGCTATTCGTGGTCAGTCTTATTTATTAACTTTA
AAAAAAATAATTGGGTAGCAACTAGCTATTATGATGAACATGCAAAAAAA
AAAAGCGAGCATAAAATCCACTAAAATATAGCACTAAGTATTTTTAGGCT
TAGCGTTATATTTTCTTTATAAAAATTATGTTTTTACGATTAAATTAGAT
ACATATGAAGGTTGAATAATTTAAAAATAATTAAGTACTAGTAAAAGTAA
TAATATAAATCTTTAATAGGAATGATATAGTTAATAAAACTATTTCATAG
ATGGCGTTACCCTCGTAAACTGTTTTTGTAAAACATAAAGCATTAATTGT
TGAACAATTTATATATTCTATAACAGCACAATTATTGATTGATTAATAAA
TGCAAACAACATCATTGAACTGGGGGTGTAAAAAGTATATTTTATGGAAC
ATTTTTGCGGTATACTTATTAAATAAATTCAAAATCCGAAGTAACTTTTA
TTTTACGTTTGAGAAGTATATATAGTAAGCATGTAATACAAAAATTCGTG
TTATTTTGTGGGAAGGAGAGACAGTTAGCAAGTCCTCTTGATAAGGATGG
ATAACACACGTAATTGAGTAGCACAATCAATTACTCTCTTTTTGGCGTAA
ATAACAATAGRTAGCCAATAAATCTATACTAAATGATAATGAAAAATAAA
TTATAATATTGTCAAATCATTTTATAATTTTTAAGTGATATGGATTGGGT
TCATTGTAACAAATGCTCATTACAATTCAGGGCGAATCCAAAATGTATCC
CTTTTCATATGACAAATTGCATGCACATTGTCTGTGGCTCTTGTTTTATA
TCCAATCGTTGTAGAATATGCGACTCATCCGACAGTTTTAGATCTGTGCT
TATAGATAAAGACATGCCGGCTCAAATGAGATTCGTCTTTCAAGATCAAA
TTCCTCCACTTCAAAGTATATTCAAAACAGCACAATTTAGAAAAAGTCAA
TGGAAACGTTTGTTCAATTCTCTTAAATGTAATTTACCCATACTGATTAA
AAAAAATCAAAATTTAACAAAGTAAGAAGAAAAACCATACTTGTATGGAT
TGTAAGCAATTAAATATTTGATACAACAGTCTTCTTTTTTAATTAGATCC
ATCACTAATGTCCAAGATCAAATAKAAAAACTGYAAGCCGATAATAAAAG
TTTGAAAAACCGAATTTCTCAGAAACAAATACAACTTCAAGAAAACAAAA
AAAGATTTTCAACAGCTCAAAAAGGAACAGAAGCCTCATACATCCTTCCC
ATGAGAAGTTCATATATGAAGGCTATGATTATTGAAAACGATATGAGTCG
TCATAAATCAAATCTTACCATGGCATTGAACAGGAATTTTTCTTTTTTTG
ATAATTTCGAAGGGTAGCATCGAGGCCAATCTAGGATAGTATCTAACGGA
GTAATGCTTAAGATAGAAAACAAGATCAATTCTTATAATAAATATATTTC
GACTCATTAGATAAAATATTTACTATTCTAAATTTATATATGAATATAAA
CAAATATATTTAAATAAACAAGTAAAAAAATTCCACCTTTTTTTATGGAA
CAATAAAAGACAAGTATGAAGCACAATCTATATAATCTTGCTAAAATAAC
AAAATAGGGAAAGTAAAAAATAAAAAAAATAACTATTGAAATCAAAACAG
TGATGCAAAAAACATAGTAAGGAGTAATAATTAATTAATCGAAATAAGCT
CAGAATAGGAAAAGAGGGGATCCTTGAAGGTAAAGAAGCTCCAAAATCTA
GCTATAAC
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