EMLSAG00000003616, EMLSAG00000003616-686382 (gene) Lepeophtheirus salmonis
|
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031 "Gallus gallus" [GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA] [GO:0001706 "endoderm formation" evidence=IEA] [GO:0001823 "mesonephros development" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009791 "post-embryonic development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation" evidence=IEA] [GO:0021517 "ventral spinal cord development" evidence=IEA] [GO:0021527 "spinal cord association neuron differentiation" evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA] [GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=IEA] [GO:0032525 "somite rostral/caudal axis specification" evidence=IEA] [GO:0035846 "oviduct epithelium development" evidence=IEA] [GO:0035847 "uterine epithelium development" evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA] [GO:0035852 "horizontal cell localization" evidence=IEA] [GO:0040019 "positive regulation of embryonic development" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IEA] [GO:0060067 "cervix development" evidence=IEA] [GO:0060068 "vagina development" evidence=IEA] [GO:0060322 "head development" evidence=IEA] [GO:0061205 "paramesonephric duct development" evidence=IEA] [GO:0072049 "comma-shaped body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009 "primitive streak formation" evidence=IEA] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=IEA] [GO:0097477 "lateral motor column neuron migration" evidence=IEA] [GO:2000543 "positive regulation of gastrulation" evidence=IEA] [GO:2000744 "positive regulation of anterior head development" evidence=IEA] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00740000114874 OrthoDB:EOG7PP56T TreeFam:TF315442 EMBL:AADN03007626 EMBL:AADN03007662 Ensembl:ENSGALT00000008686 Uniprot:F1NX79) HSP 1 Score: 102.449 bits (254), Expect = 4.423e-26 Identity = 62/100 (62.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:Lim1 species:7227 "Drosophila melanogaster" [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern formation" evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IGI] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IMP] [GO:0048749 "compound eye development" evidence=IMP] [GO:0010468 "regulation of gene expression" evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 EMBL:AE014298 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0048749 GO:GO:0007480 GO:GO:0007479 UniGene:Dm.23547 FlyBase:FBgn0260444 GeneTree:ENSGT00740000114874 OrthoDB:EOG7PP56T eggNOG:NOG257130 KO:K09372 UniGene:Dm.3025 GeneID:31813 KEGG:dme:Dmel_CG11354 CTD:31813 FlyBase:FBgn0026411 EMBL:AF181631 EMBL:AB034690 RefSeq:NP_572505.1 SMR:Q9V472 IntAct:Q9V472 MINT:MINT-756444 STRING:7227.FBpp0071216 EnsemblMetazoa:FBtr0071279 UCSC:CG11354-RA InParanoid:Q9V472 OMA:GARKMRG GenomeRNAi:31813 NextBio:775444 Uniprot:Q9V472) HSP 1 Score: 102.064 bits (253), Expect = 4.771e-25 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 25 YKDNDSESIDD-----GDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD + ++KS DD G KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 214 HDDSDQGSLDGDPDGRGDSQAENKS--PDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQ 292
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "LIM/homeobox protein Lhx1" species:9606 "Homo sapiens" [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0007399 "nervous system development" evidence=TAS] [GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021517 "ventral spinal cord development" evidence=IEA] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021537 "telencephalon development" evidence=IEA] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0032525 "somite rostral/caudal axis specification" evidence=IEA] [GO:0035502 "metanephric part of ureteric bud development" evidence=IEA] [GO:0035846 "oviduct epithelium development" evidence=ISS] [GO:0035847 "uterine epithelium development" evidence=ISS] [GO:0035849 "nephric duct elongation" evidence=IEA] [GO:0035852 "horizontal cell localization" evidence=IEA] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0044344 "cellular response to fibroblast growth factor stimulus" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0048793 "pronephros development" evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix development" evidence=ISS] [GO:0060068 "vagina development" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072177 "mesonephric duct development" evidence=IEA] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0072224 "metanephric glomerulus development" evidence=IEA] [GO:0072278 "metanephric comma-shaped body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0044344 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0048793 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0090009 GO:GO:0060059 GO:GO:0035502 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 OrthoDB:EOG7PP56T Orphanet:261265 Orphanet:247775 Orphanet:2578 TreeFam:TF315442 GO:GO:0072224 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035852 GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 OMA:DIMSHHP GO:GO:0072178 EMBL:U14755 EMBL:AC023315 EMBL:AC025882 EMBL:BC111936 EMBL:BC101674 PIR:G01507 RefSeq:NP_005559.2 UniGene:Hs.443727 ProteinModelPortal:P48742 SMR:P48742 BioGrid:110163 STRING:9606.ENSP00000254457 PhosphoSite:P48742 DMDM:60416412 PaxDb:P48742 PRIDE:P48742 DNASU:3975 Ensembl:ENST00000254457 GeneID:3975 KEGG:hsa:3975 UCSC:uc002hnh.2 GeneCards:GC17P035294 HGNC:HGNC:6593 HPA:CAB002770 MIM:601999 neXtProt:NX_P48742 PharmGKB:PA30364 InParanoid:P48742 PhylomeDB:P48742 GeneWiki:LHX1 GenomeRNAi:3975 NextBio:15580 PRO:PR:P48742 ArrayExpress:P48742 Bgee:P48742 CleanEx:HS_LHX1 Genevestigator:P48742 GO:GO:0072177 GO:GO:0072278 Uniprot:P48742) HSP 1 Score: 100.908 bits (250), Expect = 4.803e-25 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEAGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031 "Gallus gallus" [GO:0001071 "nucleic acid binding transcription factor activity" evidence=NAS] [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0008045 "motor neuron axon guidance" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021517 "ventral spinal cord development" evidence=IEP] [GO:0021522 "spinal cord motor neuron differentiation" evidence=IEP] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0060993 "kidney morphogenesis" evidence=NAS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0072179 "nephric duct formation" evidence=NAS] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] [GO:2001141 "regulation of RNA biosynthetic process" evidence=NAS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021522 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0048793 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072179 GO:GO:0072049 GO:GO:0072050 EMBL:L35569 PIR:I50375 RefSeq:NP_990744.1 UniGene:Gga.789 ProteinModelPortal:P53411 SMR:P53411 STRING:9031.ENSGALP00000008672 PaxDb:P53411 GeneID:396381 KEGG:gga:396381 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 InParanoid:P53411 KO:K09372 NextBio:20816423 PRO:PR:P53411 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035852 GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 Uniprot:P53411) HSP 1 Score: 100.523 bits (249), Expect = 6.819e-25 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKETGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:Q6PVU4 "Lim1" species:9986 "Oryctolagus cuniculus" [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium development" evidence=ISS] [GO:0035847 "uterine epithelium development" evidence=ISS] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix development" evidence=ISS] [GO:0060068 "vagina development" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0001706 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 GO:GO:0072178 EMBL:AY575212 UniGene:Ocu.3134 ProteinModelPortal:Q6PVU4 STRING:9986.ENSOCUP00000022859 Uniprot:Q6PVU4) HSP 1 Score: 99.7525 bits (247), Expect = 7.499e-25 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 69 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 167
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "LIM/homeobox protein Lhx1" species:39432 "Saimiri boliviensis boliviensis" [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium development" evidence=ISS] [GO:0035847 "uterine epithelium development" evidence=ISS] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix development" evidence=ISS] [GO:0060068 "vagina development" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0001706 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975 HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 GO:GO:0072178 EMBL:AY665239 RefSeq:NP_001266932.1 ProteinModelPortal:Q5IS89 SMR:Q5IS89 GeneID:101033157 Uniprot:Q5IS89) HSP 1 Score: 99.3673 bits (246), Expect = 1.404e-24 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "LIM/homeobox protein Lhx1" species:9598 "Pan troglodytes" [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium development" evidence=ISS] [GO:0035847 "uterine epithelium development" evidence=ISS] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix development" evidence=ISS] [GO:0060068 "vagina development" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0001706 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 GO:GO:0072178 EMBL:AY665284 RefSeq:NP_001029088.1 UniGene:Ptr.6553 ProteinModelPortal:Q5IS44 SMR:Q5IS44 GeneID:454600 KEGG:ptr:454600 InParanoid:Q5IS44 NextBio:20836212 Uniprot:Q5IS44) HSP 1 Score: 99.3673 bits (246), Expect = 1.404e-24 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA] [GO:0001706 "endoderm formation" evidence=IEA] [GO:0001823 "mesonephros development" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009791 "post-embryonic development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation" evidence=IEA] [GO:0021517 "ventral spinal cord development" evidence=IEA] [GO:0021527 "spinal cord association neuron differentiation" evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA] [GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=IEA] [GO:0032525 "somite rostral/caudal axis specification" evidence=IEA] [GO:0035846 "oviduct epithelium development" evidence=IEA] [GO:0035847 "uterine epithelium development" evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA] [GO:0035852 "horizontal cell localization" evidence=IEA] [GO:0040019 "positive regulation of embryonic development" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IEA] [GO:0060067 "cervix development" evidence=IEA] [GO:0060068 "vagina development" evidence=IEA] [GO:0060322 "head development" evidence=IEA] [GO:0061205 "paramesonephric duct development" evidence=IEA] [GO:0072049 "comma-shaped body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009 "primitive streak formation" evidence=IEA] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=IEA] [GO:0097477 "lateral motor column neuron migration" evidence=IEA] [GO:2000543 "positive regulation of gastrulation" evidence=IEA] [GO:2000744 "positive regulation of anterior head development" evidence=IEA] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953 GO:GO:0040019 GO:GO:0001658 GO:GO:0048793 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GeneTree:ENSGT00740000114874 OrthoDB:EOG7PP56T TreeFam:TF315442 CTD:3975 KO:K09372 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035852 GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0035847 OMA:DIMSHHP EMBL:CU929499 RefSeq:XP_003131754.1 ProteinModelPortal:F2Z531 SMR:F2Z531 Ensembl:ENSSSCT00000019256 GeneID:100513681 KEGG:ssc:100513681 Uniprot:F2Z531) HSP 1 Score: 99.3673 bits (246), Expect = 1.404e-24 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:LHX1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0001823 "mesonephros development" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021517 "ventral spinal cord development" evidence=IEA] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021537 "telencephalon development" evidence=IEA] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0032525 "somite rostral/caudal axis specification" evidence=IEA] [GO:0035846 "oviduct epithelium development" evidence=ISS] [GO:0035847 "uterine epithelium development" evidence=ISS] [GO:0035849 "nephric duct elongation" evidence=IEA] [GO:0035852 "horizontal cell localization" evidence=IEA] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0048793 "pronephros development" evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix development" evidence=ISS] [GO:0060068 "vagina development" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0048793 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 GeneTree:ENSGT00740000114874 OrthoDB:EOG7PP56T TreeFam:TF315442 CTD:3975 KO:K09372 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035852 GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 OMA:DIMSHHP GO:GO:0072178 EMBL:AAEX03006612 RefSeq:XP_003639347.1 ProteinModelPortal:E2RMA8 SMR:E2RMA8 Ensembl:ENSCAFT00000028326 GeneID:100856649 KEGG:cfa:100856649 NextBio:20895890 Uniprot:E2RMA8) HSP 1 Score: 99.3673 bits (246), Expect = 1.404e-24 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. GO
Match: - (symbol:Q5ISK2 "LIM homeobox protein 1" species:9541 "Macaca fascicularis" [GO:0001655 "urogenital system development" evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth forming second" evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS] [GO:0001822 "kidney development" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389 "pattern specification process" evidence=ISS] [GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009880 "embryonic pattern specification" evidence=ISS] [GO:0009948 "anterior/posterior axis specification" evidence=ISS] [GO:0009952 "anterior/posterior pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation" evidence=ISS] [GO:0010468 "regulation of gene expression" evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527 "spinal cord association neuron differentiation" evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium development" evidence=ISS] [GO:0035847 "uterine epithelium development" evidence=ISS] [GO:0040019 "positive regulation of embryonic development" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0048646 "anatomical structure formation involved in morphogenesis" evidence=ISS] [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISS] [GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix development" evidence=ISS] [GO:0060068 "vagina development" evidence=ISS] [GO:0060322 "head development" evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS] [GO:0061205 "paramesonephric duct development" evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive streak formation" evidence=ISS] [GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=ISS] [GO:0097477 "lateral motor column neuron migration" evidence=ISS] [GO:2000543 "positive regulation of gastrulation" evidence=ISS] [GO:2000744 "positive regulation of anterior head development" evidence=ISS] [GO:2000768 "positive regulation of nephron tubule epithelial cell differentiation" evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0097477 GO:GO:0001706 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0060067 GO:GO:0021871 GO:GO:0035846 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0035847 GO:GO:0072178 EMBL:AY650378 ProteinModelPortal:Q5ISK2 Uniprot:Q5ISK2) HSP 1 Score: 99.3673 bits (246), Expect = 1.444e-24 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 124 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 222
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592899385|gb|GAXK01058990.1| (TSA: Calanus finmarchicus comp127073_c1_seq2 transcribed RNA sequence) HSP 1 Score: 83.5741 bits (205), Expect = 9.275e-19 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 0
Query: 28 NDSESIDDGDKECDSKSLLXXXXXXXXXXX-XXTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
NDSE +GD + DSK ++DGPGG +R PRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 784 NDSEGSVNGDVDDDSKGYKNEDGPGGTKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQ 1005
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592899386|gb|GAXK01058989.1| (TSA: Calanus finmarchicus comp127073_c1_seq1 transcribed RNA sequence) HSP 1 Score: 83.5741 bits (205), Expect = 9.384e-19 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 0
Query: 28 NDSESIDDGDKECDSKSLLXXXXXXXXXXX-XXTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
NDSE +GD + DSK ++DGPGG +R PRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 800 NDSEGSVNGDVDDDSKGYKNEDGPGGTKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQ 1021
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592921701|gb|GAXK01036674.1| (TSA: Calanus finmarchicus comp407670_c0_seq2 transcribed RNA sequence) HSP 1 Score: 81.6481 bits (200), Expect = 6.418e-18 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 921 TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLSMRVIQ 1043
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592921702|gb|GAXK01036673.1| (TSA: Calanus finmarchicus comp407670_c0_seq1 transcribed RNA sequence) HSP 1 Score: 81.2629 bits (199), Expect = 6.706e-18 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 936 TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLSMRVIQ 1058
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592821633|gb|GAXK01132935.1| (TSA: Calanus finmarchicus comp27306_c0_seq2 transcribed RNA sequence) HSP 1 Score: 71.2478 bits (173), Expect = 3.002e-15 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTIKAKQLEVL+T F+Q PKPTR +REQLAK+TGL MRVIQ
Sbjct: 194 TTIKAKQLEVLRTVFNQNPKPTRAVREQLAKDTGLSMRVIQ 316
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592921628|gb|GAXK01036747.1| (TSA: Calanus finmarchicus comp407007_c0_seq1 transcribed RNA sequence) HSP 1 Score: 72.0182 bits (175), Expect = 7.122e-15 Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTIKAKQLEVLKT F Q PKPTR +REQLAKETGL MRVIQ
Sbjct: 698 TTIKAKQLEVLKTCFDQNPKPTRLMREQLAKETGLPMRVIQ 820
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592841556|gb|GAXK01115988.1| (TSA: Calanus finmarchicus comp168005_c0_seq1 transcribed RNA sequence) HSP 1 Score: 70.4774 bits (171), Expect = 3.550e-14 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTIKAKQLE+LK F Q PKPTR +REQLAK+TGL MRVIQ
Sbjct: 751 TTIKAKQLEILKNCFDQNPKPTRQVREQLAKDTGLPMRVIQ 873
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592765483|gb|GAXK01189085.1| (TSA: Calanus finmarchicus comp360802_c0_seq1 transcribed RNA sequence) HSP 1 Score: 62.7734 bits (151), Expect = 1.166e-11 Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTI A+Q+EVLK A+ +PKP RH+REQLA +TGL MRV+Q
Sbjct: 650 TTITARQMEVLKNAYKTSPKPARHVREQLAADTGLDMRVVQ 772
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592821634|gb|GAXK01132934.1| (TSA: Calanus finmarchicus comp27306_c0_seq1 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 2.810e-11 Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
T I AKQLE+LK F+Q PKPTR +REQLAK+T L MRVIQ
Sbjct: 1169 TNITAKQLEMLKNVFNQNPKPTRLVREQLAKDTNLSMRVIQ 1291
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Match: gi|592822784|gb|GAXK01131784.1| (TSA: Calanus finmarchicus comp161338_c0_seq1 transcribed RNA sequence) HSP 1 Score: 55.0694 bits (131), Expect = 6.331e-9 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
Query: 60 TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
TTIK QLE+LK F Q PKPT + E+L+K+TGL RVIQ
Sbjct: 638 TTIKPHQLEILKNCFDQNPKPTPKVFEELSKDTGLTKRVIQ 760
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000003616 (pep:novel supercontig:LSalAtl2s:LSalAtl2s19813:128:427:1 gene:EMLSAG00000003616 transcript:EMLSAT00000003616 description:"snap_masked-LSalAtl2s19813-processed-gene-0.1") HSP 1 Score: 201.445 bits (511), Expect = 5.937e-68 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MENNNHSLGLLLDPSGGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
MENNNHSLGLLLDPSGGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ
Sbjct: 1 MENNNHSLGLLLDPSGGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000008243 (pep:novel supercontig:LSalAtl2s:LSalAtl2s498:126445:127976:-1 gene:EMLSAG00000008243 transcript:EMLSAT00000008243 description:"maker-LSalAtl2s498-augustus-gene-1.8") HSP 1 Score: 89.3521 bits (220), Expect = 1.086e-22 Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 0
Query: 48 DDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+D KRRGPRTTIKAKQLEVLK+ F+ TPKPTRHIREQLAKETGL MRVIQ
Sbjct: 150 EDEKKEKRRGPRTTIKAKQLEVLKSTFNSTPKPTRHIREQLAKETGLPMRVIQ 202
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000008249 (pep:novel supercontig:LSalAtl2s:LSalAtl2s498:40217:45202:1 gene:EMLSAG00000008249 transcript:EMLSAT00000008249 description:"maker-LSalAtl2s498-snap-gene-0.4") HSP 1 Score: 88.9669 bits (219), Expect = 1.819e-22 Identity = 49/74 (66.22%), Postives = 55/74 (74.32%), Query Frame = 0
Query: 27 DNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DN S + + + D LD++G KRRGPRTTIKAKQ EVLKT FSQTPKPTR +REQLAKETGL MRVIQ
Sbjct: 160 DNSSPKSPESEDDDDKVKDLDENGKENKRRGPRTTIKAKQFEVLKTVFSQTPKPTRLMREQLAKETGLPMRVIQ 233
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000002055 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1373:69728:71167:-1 gene:EMLSAG00000002055 transcript:EMLSAT00000002055 description:"snap_masked-LSalAtl2s1373-processed-gene-0.14") HSP 1 Score: 78.9518 bits (193), Expect = 3.940e-19 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0
Query: 55 RRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
RRGPRTTIK KQL+VLKTAF TPKPTR +R+ LAKETGL MRVIQ
Sbjct: 155 RRGPRTTIKTKQLDVLKTAFDSTPKPTRSMRQALAKETGLPMRVIQ 200
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000010483 (pep:novel supercontig:LSalAtl2s:LSalAtl2s696:31985:42695:-1 gene:EMLSAG00000010483 transcript:EMLSAT00000010483 description:"maker-LSalAtl2s696-augustus-gene-0.26") HSP 1 Score: 71.2478 bits (173), Expect = 5.364e-16 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
Query: 52 GGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
G KR PRTTI A Q+EVLK A+ +PKP RHIREQLA++TGL MRV+Q
Sbjct: 155 GNKR--PRTTITAXQMEVLKEAYKNSPKPARHIREQLAQDTGLDMRVVQ 201
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000008242 (pep:novel supercontig:LSalAtl2s:LSalAtl2s498:108992:109816:-1 gene:EMLSAG00000008242 transcript:EMLSAT00000008242 description:"augustus_masked-LSalAtl2s498-processed-gene-1.0") HSP 1 Score: 69.707 bits (169), Expect = 6.924e-16 Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 46 LDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
LDDD GKRRGPR TIK QLE L+ F++ PKP R IRE LAK TGL MRVIQ
Sbjct: 155 LDDDK-RGKRRGPRXTIKPPQLEKLQEIFNRNPKPNRAIRENLAKNTGLAMRVIQ 208
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Match: EMLSAP00000006341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s346:279696:285335:-1 gene:EMLSAG00000006341 transcript:EMLSAT00000006341 description:"maker-LSalAtl2s346-augustus-gene-3.11") HSP 1 Score: 52.7582 bits (125), Expect = 1.845e-9 Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 49 DGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DG G +R PRT + A Q K +F +PKP R +RE LAK+TGL +RV+Q
Sbjct: 228 DGRRGPKR-PRTILTAAQRRQFKASFEISPKPCRKVREALAKDTGLSVRVVQ 278
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|60416412|sp|P48742.2|LHX1_HUMAN (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1; Short=hLim-1) HSP 1 Score: 100.908 bits (250), Expect = 1.606e-25 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEAGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|1708826|sp|P53411.1|LHX1_CHICK (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1) HSP 1 Score: 100.523 bits (249), Expect = 2.298e-25 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKETGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|60389888|sp|Q5IS44.1|LHX1_PANTR (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1 >gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1) HSP 1 Score: 99.3673 bits (246), Expect = 4.799e-25 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDN--DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D P +D+ DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQD--PSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|51702761|sp|P63007.1|LHX1_RAT (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1; Short=Rlim >gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1 >gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein LMX-2; AltName: Full=Homeobox protein Lim-1) HSP 1 Score: 99.3673 bits (246), Expect = 5.594e-25 Identity = 62/100 (62.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 127 ENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|267419|sp|P29674.1|LHX1_XENLA (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1; Short=Xlim1; Short=x-Lhx1; Short=xLIM-1) HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-23 Identity = 51/72 (70.83%), Postives = 54/72 (75.00%), Query Frame = 0
Query: 29 DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DSES + DKE DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 154 DSESANVSDKEAGINEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|2497670|sp|Q90476.1|LHX1_DANRE (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1) HSP 1 Score: 94.3597 bits (233), Expect = 4.168e-23 Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 0
Query: 47 DDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DD GGKRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 171 DDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|2506818|sp|P20154.2|LIN11_CAEEL (RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage protein 11) HSP 1 Score: 93.9745 bits (232), Expect = 5.538e-23 Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = 0
Query: 29 DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D +DDG+ +C + DD KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA ETGL MRVIQ
Sbjct: 217 DEVGLDDGEGDCGKDN--SDDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQ 286
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN (RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5) HSP 1 Score: 89.7373 bits (221), Expect = 1.565e-21 Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 0
Query: 12 LDPSGGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
L P D+L P + ++S S DKE + + ++ G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 141 LSPDLQDALQDDPKETDNSTS---SDKE-TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|47606426|sp|P61376.1|LHX5_RAT (RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5; AltName: Full=Homeobox protein LIM-2 >gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5) HSP 1 Score: 89.7373 bits (221), Expect = 1.955e-21 Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0
Query: 52 GGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. SwissProt
Match: gi|1708831|sp|P37137.2|LHX5_XENLA (RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5; AltName: Full=Homeobox protein LIM-5; Short=xLIM-5; AltName: Full=xLIM-2A) HSP 1 Score: 88.5817 bits (218), Expect = 4.084e-21 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 47 DDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
++ G KRRGPRTTIKAKQLE LK AF TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 172 EEQNSGTKRRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQ 225
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: EFX66374.1 (hypothetical protein DAPPUDRAFT_11288, partial [Daphnia pulex]) HSP 1 Score: 103.605 bits (257), Expect = 3.321e-27 Identity = 57/80 (71.25%), Postives = 61/80 (76.25%), Query Frame = 0
Query: 28 NDSESIDDGDKECDSKS-------LLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
NDSE DGD E +S+S D+ G G KRRGPRTTIKAKQLE+LK AFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 188 NDSEGSVDGDGEGESRSDNPSESKSPDEGGAGSKRRGPRTTIKAKQLEILKNAFSQTPKPTRHIREQLAKETGLPMRVIQ 267
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: AGB95201.1 (LIM homeobox 1, isoform B [Drosophila melanogaster]) HSP 1 Score: 103.605 bits (257), Expect = 3.586e-27 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 25 YKDNDSESIDD-----GDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD + ++KS DD G KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 56 HDDSDQGSLDGDPDGRGDSQAENKS--PDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQ 134
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: EAA05265.3 (AGAP011134-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 103.99 bits (258), Expect = 9.548e-27 Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query: 25 YKDNDSESIDDGDKECDSKSLLD----DDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD +C S + DDG G KRRGPRTTIKAKQLEVLK AFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 211 HDDSDQGSLD-GDPDCRGDSQAENKSPDDGAGSKRRGPRTTIKAKQLEVLKNAFSQTPKPTRHIREQLAKETGLPMRVIQ 289
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: AAF46413.2 (LIM homeobox 1, isoform A [Drosophila melanogaster]) HSP 1 Score: 102.064 bits (253), Expect = 5.684e-26 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 25 YKDNDSESIDD-----GDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD + ++KS DD G KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 214 HDDSDQGSLDGDPDGRGDSQAENKS--PDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQ 292
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: gb|EFA05667.1| (lim1 [Tribolium castaneum]) HSP 1 Score: 99.7525 bits (247), Expect = 3.028e-25 Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 0
Query: 27 DNDSESIDDGDKEC-DSKS---LLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D++ ++ DGD E DS++ DD G KRRGPRTTIKAKQLE+LKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 269 DSEDQNSFDGDAEMRDSQTENKSPDDSSAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQ 346
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: gb|KPM08473.1| (hypothetical protein QR98_0069940 [Sarcoptes scabiei]) HSP 1 Score: 93.9745 bits (232), Expect = 1.163e-24 Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0
Query: 47 DDDGPGG-KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D++ PGG KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA ETGL MRVIQ
Sbjct: 125 DENQPGGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLANETGLNMRVIQ 179
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: EEB13732.1 (LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]) HSP 1 Score: 96.6709 bits (239), Expect = 2.335e-24 Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 0
Query: 47 DDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DD G KRRGPRTTIKAKQLE+LK AFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 174 DDGNSGSKRRGPRTTIKAKQLEILKNAFSQTPKPTRHIREQLAKETGLPMRVIQ 227
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: gb|KFM66248.1| (LIM/homeobox protein Lhx1, partial [Stegodyphus mimosarum]) HSP 1 Score: 93.9745 bits (232), Expect = 4.989e-24 Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 0
Query: 47 DDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D++ PG KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 42 DENTPGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 95
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: gb|KFM57394.1| (LIM/homeobox protein Lhx1, partial [Stegodyphus mimosarum]) HSP 1 Score: 92.4337 bits (228), Expect = 1.523e-23 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
Query: 47 DDDGPGG-KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+D+G GG KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 18 NDEGAGGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 72
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Match: XP_006569141.1 (PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Apis mellifera]) HSP 1 Score: 91.2781 bits (225), Expect = 3.448e-22 Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 0
Query: 54 KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
KRRGPRTTIKAKQLE+LK+AFS TPKPTRHIREQLAKETGL MRVIQ
Sbjct: 244 KRRGPRTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQ 290
BLAST of EMLSAG00000003616 vs. nr
Match: gi|546687045|gb|ERL95963.1| (hypothetical protein D910_00695, partial [Dendroctonus ponderosae]) HSP 1 Score: 107.842 bits (268), Expect = 1.187e-27 Identity = 67/107 (62.62%), Postives = 75/107 (70.09%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPSG--GDSLDYGPYKDNDSE--SIDDGDKEC-DSKS---LLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
E NN+SL P +S+ P +NDSE + DGD E DS++ DD G G KRRGPRTTIKAKQLE+LKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 73 ETNNNSL-----PHSDISNSIGQDPKTENDSEDQTSLDGDPETRDSQTENKSPDDSGAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQ 174
BLAST of EMLSAG00000003616 vs. nr
Match: gi|1121121023|ref|XP_019549238.1| (PREDICTED: LIM/homeobox protein Lhx1-like, partial [Aedes albopictus]) HSP 1 Score: 105.916 bits (263), Expect = 6.831e-27 Identity = 58/80 (72.50%), Postives = 63/80 (78.75%), Query Frame = 0
Query: 25 YKDNDSESIDDGDKECDSKSLLD----DDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD +C S + DDG G KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 101 HDDSDQGSLD-GDPDCRGDSQAENKSPDDGGGSKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLPMRVIQ 179
BLAST of EMLSAG00000003616 vs. nr
Match: gi|357631672|gb|EHJ79141.1| (hypothetical protein KGM_15595 [Danaus plexippus]) HSP 1 Score: 103.99 bits (258), Expect = 3.652e-26 Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 0
Query: 6 HSLGLLLDPSGGDSLDYGPYKDNDSESIDDGDKE---CDSKSLLDDDGPGG-KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
H+ L P + D P++D++ + DGD E +++ DDG GG KRRGPRTTIKAKQLE+LK+AFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 60 HAPHPALHPDLSHNGDAKPHEDSEDQGSLDGDPETRDSQAENKSPDDGNGGSKRRGPRTTIKAKQLEILKSAFSQTPKPTRHIREQLAKETGLPMRVIQ 158
BLAST of EMLSAG00000003616 vs. nr
Match: gi|704286156|ref|XP_010157686.1| (PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like, partial [Eurypyga helias]) HSP 1 Score: 103.219 bits (256), Expect = 3.679e-26 Identity = 62/100 (62.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 44 ENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 142
BLAST of EMLSAG00000003616 vs. nr
Match: gi|929379785|ref|XP_014100241.1| (PREDICTED: protein lin-11-like, partial [Bactrocera oleae]) HSP 1 Score: 102.834 bits (255), Expect = 3.999e-26 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 25 YKDNDSESIDD-----GDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD + ++KS DD G KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 56 HDDSDQGSLDGDPDGRGDSQAENKS--PDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQ 134
BLAST of EMLSAG00000003616 vs. nr
Match: gi|537142677|gb|ERE68591.1| (LIM/homeobox protein Lhx1-like protein [Cricetulus griseus]) HSP 1 Score: 102.064 bits (253), Expect = 6.983e-26 Identity = 62/100 (62.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 36 ENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 134
BLAST of EMLSAG00000003616 vs. nr
Match: gi|677978143|ref|XP_009072887.1| (PREDICTED: LIM/homeobox protein Lhx1, partial [Acanthisitta chloris]) HSP 1 Score: 102.834 bits (255), Expect = 8.972e-26 Identity = 62/100 (62.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 2 ENNNHSLGLLLDPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
EN+ HS DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 69 ENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 167
BLAST of EMLSAG00000003616 vs. nr
Match: gi|121223170|gb|ABM47712.1| (LHX1, partial [Saguinus labiatus]) HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-25 Identity = 58/89 (65.17%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 13 DPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 5 DPSLSPDSQDPSQDDAKDSESANVSDKEAGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 92
BLAST of EMLSAG00000003616 vs. nr
Match: gi|1121120978|ref|XP_019549222.1| (PREDICTED: LIM/homeobox protein Lhx5, partial [Aedes albopictus]) HSP 1 Score: 105.145 bits (261), Expect = 1.715e-25 Identity = 58/80 (72.50%), Postives = 63/80 (78.75%), Query Frame = 0
Query: 25 YKDNDSESIDDGDKECDSKSLLD----DDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+ D+D S+D GD +C S + DDG G KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 204 HDDSDQGSLD-GDPDCRGDSQAENKSPDDGGGSKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLPMRVIQ 282
BLAST of EMLSAG00000003616 vs. nr
Match: gi|700438723|ref|XP_009958541.1| (PREDICTED: LIM/homeobox protein Lhx1, partial [Leptosomus discolor]) HSP 1 Score: 99.7525 bits (247), Expect = 2.188e-25 Identity = 58/89 (65.17%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 13 DPS-GGDSLDYGPYKDNDSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DPS DS D DSES + DKE S DD G KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL MRVIQ
Sbjct: 5 DPSLSPDSQDPSQDDAKDSESANVSDKETGSNEN-DDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 92
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold865_size87005-snap-gene-0.17 (protein:Tk05472 transcript:maker-scaffold865_size87005-snap-gene-0.17-mRNA-1 annotation:"lim homeobox protein lhx1-like") HSP 1 Score: 107.842 bits (268), Expect = 6.663e-30 Identity = 68/108 (62.96%), Postives = 72/108 (66.67%), Query Frame = 0
Query: 1 MENNNHSLG---LLLDPSGGDSLDYGPYKDN----DSESIDDGDKEC-DSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
ME NN+SL L GG P DN D E +D K C DS++ DD GKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 24 METNNNSLSPEKALFGGGGGPDQLIKPELDNEDSMDGEGLDG--KGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQ 129
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold355_size198070-snap-gene-0.37 (protein:Tk03310 transcript:maker-scaffold355_size198070-snap-gene-0.37-mRNA-1 annotation:"lim homeobox protein lhx1-like") HSP 1 Score: 107.842 bits (268), Expect = 6.663e-30 Identity = 68/108 (62.96%), Postives = 72/108 (66.67%), Query Frame = 0
Query: 1 MENNNHSLG---LLLDPSGGDSLDYGPYKDN----DSESIDDGDKEC-DSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
ME NN+SL L GG P DN D E +D K C DS++ DD GKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 24 METNNNSLSPEKALFGGGGGPDQLIKPELDNEDSMDGEGLDG--KGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQ 129
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1045_size67585-snap-gene-0.11 (protein:Tk09392 transcript:maker-scaffold1045_size67585-snap-gene-0.11-mRNA-1 annotation:"hypothetical protein D910_00695 partial") HSP 1 Score: 95.1301 bits (235), Expect = 6.583e-26 Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 0
Query: 47 DDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+D GKRRGPRTTIKAKQLEVLKTAF QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 134 EDMNSAGKRRGPRTTIKAKQLEVLKTAFDQTPKPTRHIREQLAKETGLPMRVIQ 187
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold355_size198070-snap-gene-0.33 (protein:Tk03303 transcript:maker-scaffold355_size198070-snap-gene-0.33-mRNA-1 annotation:"hypothetical protein D910_00695 partial") HSP 1 Score: 95.1301 bits (235), Expect = 6.583e-26 Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 0
Query: 47 DDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
+D GKRRGPRTTIKAKQLEVLKTAF QTPKPTRHIREQLAKETGL MRVIQ
Sbjct: 134 EDMNSAGKRRGPRTTIKAKQLEVLKTAFDQTPKPTRHIREQLAKETGLPMRVIQ 187
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1045_size67585-processed-gene-0.2 (protein:Tk09389 transcript:snap_masked-scaffold1045_size67585-processed-gene-0.2-mRNA-1 annotation:"lin-11 protein") HSP 1 Score: 93.2041 bits (230), Expect = 2.388e-24 Identity = 52/86 (60.47%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 18 DSLDYGPYKDN---DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D LD +N D +S D++ DS+ +DG GKRRGPRTTIKAKQLEVLK F+QTPKPTR +REQLAKET L MRVIQ
Sbjct: 138 DKLDSEADTENVHPDEDSPKSNDEDSDSEKGKAEDGKDGKRRGPRTTIKAKQLEVLKNVFAQTPKPTRLMREQLAKETSLPMRVIQ 223
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold355_size198070-processed-gene-0.12 (protein:Tk03300 transcript:snap_masked-scaffold355_size198070-processed-gene-0.12-mRNA-1 annotation:"lin-11 protein") HSP 1 Score: 93.2041 bits (230), Expect = 2.388e-24 Identity = 52/86 (60.47%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 18 DSLDYGPYKDN---DSESIDDGDKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D LD +N D +S D++ DS+ +DG GKRRGPRTTIKAKQLEVLK F+QTPKPTR +REQLAKET L MRVIQ
Sbjct: 138 DKLDSEADTENVHPDEDSPKSNDEDSDSEKGKAEDGKDGKRRGPRTTIKAKQLEVLKNVFAQTPKPTRLMREQLAKETSLPMRVIQ 223
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold865_size87005-processed-gene-0.4 (protein:Tk05471 transcript:snap_masked-scaffold865_size87005-processed-gene-0.4-mRNA-1 annotation:"lin-11") HSP 1 Score: 91.6633 bits (226), Expect = 9.188e-24 Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 0
Query: 37 DKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D++ DS+ +DD KRRGPRTTIKAKQLEVLK FSQTPKPTR +REQLAKETGL MRVIQ
Sbjct: 96 DQDSDSEKSKNDDSKENKRRGPRTTIKAKQLEVLKNVFSQTPKPTRLMREQLAKETGLPMRVIQ 159
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold355_size198070-processed-gene-0.21 (protein:Tk03309 transcript:snap_masked-scaffold355_size198070-processed-gene-0.21-mRNA-1 annotation:"lin-11") HSP 1 Score: 91.6633 bits (226), Expect = 9.188e-24 Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 0
Query: 37 DKECDSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
D++ DS+ +DD KRRGPRTTIKAKQLEVLK FSQTPKPTR +REQLAKETGL MRVIQ
Sbjct: 96 DQDSDSEKSKNDDSKENKRRGPRTTIKAKQLEVLKNVFSQTPKPTRLMREQLAKETGLPMRVIQ 159
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1206_size55693-snap-gene-0.7 (protein:Tk10608 transcript:maker-scaffold1206_size55693-snap-gene-0.7-mRNA-1 annotation:"lim homeobox protein partial") HSP 1 Score: 63.929 bits (154), Expect = 1.375e-14 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0
Query: 41 DSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXM 96
D +S + DG G +R PRTTI A+Q++VLK A+ +PKP RH+REQLA++TGL M
Sbjct: 101 DFESTRNKDGLDGNKR-PRTTITARQMDVLKEAYKASPKPARHVREQLAQDTGLDM 155
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold491_size156641-snap-gene-0.29 (protein:Tk05483 transcript:maker-scaffold491_size156641-snap-gene-0.29-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_24627") HSP 1 Score: 54.299 bits (129), Expect = 2.106e-10 Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 49 DGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
DG G +R PRT + A Q K +F +PKP R +RE LAKETGL +RV+Q
Sbjct: 141 DGRRGPKR-PRTILTAVQRRQFKASFEISPKPCRKVRESLAKETGLSVRVVQ 191 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003616 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000003616 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000003616 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 7
BLAST of EMLSAG00000003616 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000003616 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000003616 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000003616 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s19813:128..427+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003616-686382 ID=EMLSAG00000003616-686382|Name=EMLSAG00000003616|organism=Lepeophtheirus salmonis|type=gene|length=300bp|location=Sequence derived from alignment at LSalAtl2s19813:128..427+ (Lepeophtheirus salmonis)back to top Add to Basket
|