EMLSAG00000004767, EMLSAG00000004767-687533 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835585|gb|GAXK01121959.1| (TSA: Calanus finmarchicus comp107123_c10_seq26 transcribed RNA sequence) HSP 1 Score: 48.9062 bits (115), Expect = 7.800e-6 Identity = 36/172 (20.93%), Postives = 81/172 (47.09%), Query Frame = 0 Query: 63 QGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 731 NGDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1225
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835597|gb|GAXK01121947.1| (TSA: Calanus finmarchicus comp107123_c10_seq14 transcribed RNA sequence) HSP 1 Score: 48.9062 bits (115), Expect = 9.172e-6 Identity = 33/160 (20.62%), Postives = 74/160 (46.25%), Query Frame = 0 Query: 63 QGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKTLM 216 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT + Sbjct: 893 NGDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFL 1351
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835579|gb|GAXK01121965.1| (TSA: Calanus finmarchicus comp107123_c10_seq32 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.025e-5 Identity = 33/160 (20.62%), Postives = 74/160 (46.25%), Query Frame = 0 Query: 63 QGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKTLM 216 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT + Sbjct: 658 NGDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFL 1116
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835587|gb|GAXK01121957.1| (TSA: Calanus finmarchicus comp107123_c10_seq24 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.027e-5 Identity = 36/171 (21.05%), Postives = 81/171 (47.37%), Query Frame = 0 Query: 64 GLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 731 GDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1222
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835599|gb|GAXK01121945.1| (TSA: Calanus finmarchicus comp107123_c10_seq12 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.100e-5 Identity = 36/172 (20.93%), Postives = 81/172 (47.09%), Query Frame = 0 Query: 63 QGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 861 NGDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1355
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835577|gb|GAXK01121967.1| (TSA: Calanus finmarchicus comp107123_c10_seq34 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.144e-5 Identity = 36/171 (21.05%), Postives = 81/171 (47.37%), Query Frame = 0 Query: 64 GLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 731 GDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1222
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835581|gb|GAXK01121963.1| (TSA: Calanus finmarchicus comp107123_c10_seq30 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.163e-5 Identity = 36/171 (21.05%), Postives = 81/171 (47.37%), Query Frame = 0 Query: 64 GLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 731 GDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1222
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835582|gb|GAXK01121962.1| (TSA: Calanus finmarchicus comp107123_c10_seq29 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.170e-5 Identity = 36/171 (21.05%), Postives = 81/171 (47.37%), Query Frame = 0 Query: 64 GLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 731 GDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1222
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835602|gb|GAXK01121942.1| (TSA: Calanus finmarchicus comp107123_c10_seq9 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 1.207e-5 Identity = 36/172 (20.93%), Postives = 81/172 (47.09%), Query Frame = 0 Query: 63 QGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKT-LMQQAGLQLPNNC 227 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT L++ + ++ NN Sbjct: 873 NGDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFLLRISHEKVTNNA 1367
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Match: gi|592835580|gb|GAXK01121964.1| (TSA: Calanus finmarchicus comp107123_c10_seq31 transcribed RNA sequence) HSP 1 Score: 48.1358 bits (113), Expect = 1.266e-5 Identity = 33/160 (20.62%), Postives = 74/160 (46.25%), Query Frame = 0 Query: 63 QGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSD-----ICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCE-FYTILEGCGGILRECYPEEKLKETSSGQLDIIKTLM 216 G C ++ ++ C E + +C+ +++++ + L I+ + G+ + GL+ CD +KY+ + + D C + K +I K+ C + T + + + + + K + C+ TI C L EC+ E+ +++ L+ +KT + Sbjct: 658 NGDTCHLVKSVVGKCGELWERCHTSREVRRMRDLHIEALVRQYGS--EGGLE--GCDLVQKYRQSGRTPDDPVEDVTCSDTKTMDIQTKFQTCSHST---ATSVYQTIQDLTSVKIISDKLCKALTTIGTVCVKHLNECFAEDDVRQMRKSHLEEMKTFL 1116
BLAST of EMLSAG00000004767 vs. L. salmonis peptides
Match: EMLSAP00000004767 (pep:novel supercontig:LSalAtl2s:LSalAtl2s250:742123:765557:-1 gene:EMLSAG00000004767 transcript:EMLSAT00000004767 description:"augustus_masked-LSalAtl2s250-processed-gene-7.6") HSP 1 Score: 513.457 bits (1321), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 Query: 1 MLSYTFILLMFVKLSHSQESFGIIPGLVSKCSESEIQEIEVRRKKCVTQKEQAFQSSQVEKTQGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSDICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCEFYTILEGCGGILRECYPEEKLKETSSGQLDIIKTLMQQAGLQLPNNCDKEEHQPAGAGSIIASISLIVPLIHLLN 255 MLSYTFILLMFVKLSHSQESFGIIPGLVSKCSESEIQEIEVRRKKCVTQKEQAFQSSQVEKTQGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSDICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCEFYTILEGCGGILRECYPEEKLKETSSGQLDIIKTLMQQAGLQLPNNCDKEEHQPAGAGSIIASISLIVPLIHLLN Sbjct: 1 MLSYTFILLMFVKLSHSQESFGIIPGLVSKCSESEIQEIEVRRKKCVTQKEQAFQSSQVEKTQGLLCSYIEEIIEDCSEEYNKCYHEQQMKQFKALQIQIFEQLIGAHKDSGLKLNACDTYEKYKMNSFSGSDICDEKKIKEISIKYGACINKTDLFQSKFEKIVSNPKAFKEVEKIFCEFYTILEGCGGILRECYPEEKLKETSSGQLDIIKTLMQQAGLQLPNNCDKEEHQPAGAGSIIASISLIVPLIHLLN 255 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004767 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000004767 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000004767 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000004767 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004767 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004767 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000004767 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s250:742123..765557- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004767-687533 ID=EMLSAG00000004767-687533|Name=EMLSAG00000004767|organism=Lepeophtheirus salmonis|type=gene|length=23435bp|location=Sequence derived from alignment at LSalAtl2s250:742123..765557- (Lepeophtheirus salmonis)back to top Add to Basket
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