EMLSAG00000008062, EMLSAG00000008062-690828 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008062 vs. L. salmonis peptides
Match: EMLSAP00000008062 (pep:novel supercontig:LSalAtl2s:LSalAtl2s47:241369:243591:1 gene:EMLSAG00000008062 transcript:EMLSAT00000008062 description:"maker-LSalAtl2s47-snap-gene-2.37") HSP 1 Score: 249.595 bits (636), Expect = 4.132e-86 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 Query: 1 MSSDGEKEDLKEDEGGDSSSPPPVAPASSDVKEDQEVRRPNGRVISDFLGACGSLDIKKMREILDKDDLDPNDIVDDVGQNGFHYAVCSILRNNTSRQTSVLKYLRKKGLNESTNASSGPIFV 123 MSSDGEKEDLKEDEGGDSSSPPPVAPASSDVKEDQEVRRPNGRVISDFLGACGSLDIKKMREILDKDDLDPNDIVDDVGQNGFHYAVCSILRNNTSRQTSVLKYLRKKGLNESTNASSGPIFV Sbjct: 1 MSSDGEKEDLKEDEGGDSSSPPPVAPASSDVKEDQEVRRPNGRVISDFLGACGSLDIKKMREILDKDDLDPNDIVDDVGQNGFHYAVCSILRNNTSRQTSVLKYLRKKGLNESTNASSGPIFV 123
BLAST of EMLSAG00000008062 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold462_size163801-snap-gene-0.39 (protein:Tk04564 transcript:maker-scaffold462_size163801-snap-gene-0.39-mRNA-1 annotation:"achain crystal structure of engineered northeast structural genomics consortium target") HSP 1 Score: 47.7506 bits (112), Expect = 9.752e-8 Identity = 25/79 (31.65%), Postives = 46/79 (58.23%), Query Frame = 0 Query: 48 FLGACGSLDIKKMREILDKDDLDPNDIVDDVGQNGFHYAVCSILRNNTSRQTSVLKYLRKKG--LNES-TNASSGPIFV 123 FL AC +L+ + + ++ D LD D + QNG H+ V S +++ +Q +++KYL KG +N++ T+ P+F+ Sbjct: 30 FLAACSNLNQRSIFNAVESDKLDVTRTTDAIEQNGLHFVVSSA-KHDLKKQANIVKYLVSKGADVNQARTSDGWTPLFL 107 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008062 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000008062 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000008062 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000008062 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000008062 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000008062 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000008062 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s47:241369..243591+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008062-690828 ID=EMLSAG00000008062-690828|Name=EMLSAG00000008062|organism=Lepeophtheirus salmonis|type=gene|length=2223bp|location=Sequence derived from alignment at LSalAtl2s47:241369..243591+ (Lepeophtheirus salmonis)back to top Add to Basket
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