EMLSAG00000012737, EMLSAG00000012737-695503 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592871809|gb|GAXK01085753.1| (TSA: Calanus finmarchicus comp78591_c1_seq1 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 2.193e-5 Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 0 Query: 19 FCLILFMVTTHGNILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYKGSKECEESKNKDYNPNVP 82 C +L G +LLP++ PV++ + LL + HAV +G +E ++SK++D+NPNVP Sbjct: 909 LCGLLGAQLGDGEVLLPVVGPVQLSWWWLTSFVCVCLLADTHAVDEGDEEGDKSKHEDHNPNVP 1100
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592905886|gb|GAXK01052489.1| (TSA: Calanus finmarchicus comp2094414_c1_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 1.907e+0 Identity = 15/36 (41.67%), Postives = 19/36 (52.78%), Query Frame = 0 Query: 2 IHSNFNAPRSLFFQYLGFCLILFMVTTHGNILLPMM 37 IH NF R + Q LG CLI F + + LLP + Sbjct: 691 IHDNFKKSRKVSNQALGSCLICFCLCSCLKSLLPRL 798
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831596|gb|GAXK01125948.1| (TSA: Calanus finmarchicus comp310080_c1_seq103 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.497e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831616|gb|GAXK01125928.1| (TSA: Calanus finmarchicus comp310080_c1_seq83 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.583e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831624|gb|GAXK01125920.1| (TSA: Calanus finmarchicus comp310080_c1_seq75 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.593e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831625|gb|GAXK01125919.1| (TSA: Calanus finmarchicus comp310080_c1_seq74 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.598e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831627|gb|GAXK01125917.1| (TSA: Calanus finmarchicus comp310080_c1_seq72 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.598e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831632|gb|GAXK01125912.1| (TSA: Calanus finmarchicus comp310080_c1_seq67 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.606e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831633|gb|GAXK01125911.1| (TSA: Calanus finmarchicus comp310080_c1_seq66 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.607e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Match: gi|592831639|gb|GAXK01125905.1| (TSA: Calanus finmarchicus comp310080_c1_seq60 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.618e+0 Identity = 18/65 (27.69%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 25 MVTTHG-NILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYK----------GSKECEESKNKDYN 78 M T+ G ++L+P +R K +STI ++ ++TNI A + S++CE + + Y+ Sbjct: 161 MATSEGSDMLVPPVRMCKTIMSTIPTPAVARIVTNIRADRQEEIEISLSKDNSEDCEPVQTRKYD 355
BLAST of EMLSAG00000012737 vs. L. salmonis peptides
Match: EMLSAP00000012737 (pep:novel supercontig:LSalAtl2s:LSalAtl2s967:83515:84009:-1 gene:EMLSAG00000012737 transcript:EMLSAT00000012737 description:"maker-LSalAtl2s967-snap-gene-0.74") HSP 1 Score: 176.792 bits (447), Expect = 1.017e-58 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 Query: 1 MIHSNFNAPRSLFFQYLGFCLILFMVTTHGNILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYKGSKECEESKNKDYNPNVPTWI 85 MIHSNFNAPRSLFFQYLGFCLILFMVTTHGNILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYKGSKECEESKNKDYNPNVPTWI Sbjct: 1 MIHSNFNAPRSLFFQYLGFCLILFMVTTHGNILLPMMRPVKVPVSTIFVNPISSLLTNIHAVYKGSKECEESKNKDYNPNVPTWI 85 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012737 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000012737 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000012737 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000012737 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000012737 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000012737 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000012737 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s967:83515..84009- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012737-695503 ID=EMLSAG00000012737-695503|Name=EMLSAG00000012737|organism=Lepeophtheirus salmonis|type=gene|length=495bp|location=Sequence derived from alignment at LSalAtl2s967:83515..84009- (Lepeophtheirus salmonis)back to top Add to Basket
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