EMLSAT00000000604, EMLSAT00000000604-696451 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000604
Unique NameEMLSAT00000000604-696451
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:441513..445120 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000604 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000604EMLSAG00000000604-683370Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002623EMLSAE00000002623-711551Lepeophtheirus salmonisexon
EMLSAE00000002624EMLSAE00000002624-711552Lepeophtheirus salmonisexon
EMLSAE00000002625EMLSAE00000002625-711553Lepeophtheirus salmonisexon
EMLSAE00000002626EMLSAE00000002626-711554Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777705auto777705Lepeophtheirus salmonispolypeptide
EMLSAP00000000604EMLSAP00000000604Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000604

>EMLSAP00000000604 ID=EMLSAP00000000604|Name=EMLSAP00000000604|organism=Lepeophtheirus salmonis|type=polypeptide|length=180bp
MAHIQKRYVQTLVVLGATLKNIGFRWLYMYQLPYVPEFELTLMGNTQYNE
DDRSSKDIEAYDFTFSRQSNRVDFELICRSSEFVDKFTVQIVENSGQKPH
QTHSKRVNAYIKQFLDISNDNLSNDYNIESSKELELNYGAPRLLNSIFNK
ILDLTFQKDEPKPTNELSHYNAPPSIPCKF
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mRNA from alignment at LSalAtl2s109:441513..445120-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000604-696451 ID=EMLSAT00000000604-696451|Name=EMLSAT00000000604|organism=Lepeophtheirus salmonis|type=mRNA|length=3608bp|location=Sequence derived from alignment at LSalAtl2s109:441513..445120- (Lepeophtheirus salmonis)
ATGGCCCACATCCAAAAGCGCTATGTTCAAACATTAGTCGTTCTTGGAGC
TACCTTAAAAAATATAGGTTGGTATTTTATTCAATTTCCTTCGTTTTTTA
GTAATGATTATCAATCAGGATTTAGGTGGCTCTACATGTATCAACTTCCT
TACGTGCCCGAGTTTGAATTAACGCTAATGGGGAATACACAATACAACGA
AGATGATCGCTCTTCCAAGGATATTGAAGCCTATGATTTTACATTTTCTC
GCCAAAGTAATCGTGTACTTTTGTATAAAGTTATTCAATGCAAAGAGTTA
ATACATTATTATCCGTAGGTGATTGGATTGGGGGTTTGAACTATTATCGA
AATTTTCCTCTTCACTTATGTCATCTTCGCTACAATGAAGAAAGAAAATC
CACTCCTCTACCCATCAAAGTTATGTTCATCGCTGGAGACGATAGAAATA
AAGTTAGTTTRTATAATGTACATTAGACTGGTATTTTTTTTTTTTTTTTT
CTAAATGCAAGGGGGAGATAGTCCAAAAATGATTATTTTCATAAAAAATG
AGAAAATAGAAAAGTTTGAACCATATTGATTCGTGTTTAGAGGTTATGAC
GGGCCTTTTTTAGGAAAAAAAGTAGAATTTTTACGTTCAAAATAATCAAT
ATTAGGCAAAATAGAGTATTTTATGAAAATAACTATTTTAGATAAATAAA
CAACCTTTCAAAAGTTGTACAACATTTTTGCTTTAAAATGATTATTTTTC
ATAAAAAAGTTATGAGTACAGTATTTTTCTACGGCGTATAGAACGCACTT
TTTTGCCCTTAATATATAACTGATGTCTAAACTTTTTTGGAAAAGCGTTC
TTCAAAGTGCAATGCTAAAAATAGTGAAATGGATAGTAGTGCTTATTCTT
ACCATCATACAAGTAGCAGATATCATTGGATAAATGCAAAAGTGATGTAA
CTATCAAGGCCATATTATTTTCTTATTTTATAGTTTTCTCTGACCTTATA
AGGAATACGAGACATGTCTTTAAAGATATAATTTTATGATCGATAATTTT
TTAGGGTGATTCTAGCAACACCAAGTGACTTAGCTACCAGGTTCTAAAAA
ATCTACTTGGCAAAATTAACGAAAGTGACAGATAAGTCAATTTTGCACCA
GCTTTATATTCGTTAATGGTTTTTCTCCAGAAATAATTAGCATTTTGAGT
TTTTGTGTCAGGGAAATTATTTATTGACTGTGGAGGAAAAAAATCCACGA
AAATCGATTCTATATACATAAAACACTCTTTTAACTAGCATATCTCAGAT
TGATAAAATTGTTTTTTACGTCACTTTTGCTTTATTCCCACGATATTATA
TTTATTAATGCAGGGCCGTCCGCAGGGGGTGGGCTGGAGGGACTCTAGTC
TCCCAACCAAATTAAGGAACTTTTACTACAAAATTTAATATTTGAATTTT
TTTTTTAATTTAATTTTTCCAATTTTTTCTAAAAAAAATTTTTTCTTTTT
AAATATGTGGATTTATGAAATTTTTTGAGAATAACGATAGATTTTTGAAG
TTTTAACCAAAAAATTAATATTTTAAATTTTTTTTCAAAAAAATTCTAAA
AACCAAGCTCTCTCCCCCCCACCCCCCAAAAAAAGAAAATATATAATCCT
GCGAATACCCCTGTGATGATTTAAAGTCAAGAAGGGATTATAGGTGTTTT
TAGCAGTATCTTTGATTTACTTGGGCGATACTCCAACATGAAGAATATAA
TTTAGTCATCCCAGAGTAATGATGGATCTTAAATGGATAAAATTTGGGAG
ATATTCAATTATGATATGTACTTTTTCCCTTTTGATTAACGCTAAATAAT
TTTTTTAAAGATCTTATGAGTTAAGTGATATACATTAAGGTCAACAAAAA
CCCTTTGATAATGAAACGAGGAACATAAGCCCTCCGAAAAGCTTCGGTTA
GGTTTTCTGATGACCTAGAGCATTATTATTCATAAATAATTTACTCCAAT
CCTATATTCGTAATTCTACGTATCACAATTGCCTACTGTAAATTCTTCCT
TTAATTTTCATTTGCAACTCGCACACAGCATATATTGTTTATCCTATTTT
GTCATTCACAGGTGGACTTCGAATTAATATGCAGGTCATCAGAGTTTGTT
GATAAATTTACTGTTCAAATTGTGGAGAACTCGGGTCAAAAACCTCACCA
GACGCATTCAAAAAGAGTTAATGCCTACATTAAGCAATTCCTGGATATTA
GCAATGATAACCTGAGCAATGATTATAATATAGGTATTGACATAGACTCT
TAACCAGGAATATTCAATTACAATTGGAGCTGGTCTCATTTCTAAACCAA
AGCCTTAAACTGGGCCAGAAATATATTAATAAACATTCACAATTGGGATA
TAATTACAGTTGGATCATTCCACATCACATATCCCACAGGTTTTAGCCTC
AACAACTCATAATTTCATGAAATTTAGAATACTTAAATGTATATTTTTAC
TTCGAAACTCCTAATCTCATTTTTCTTTGATAATAATCAGAGGATTGATT
CACTAGTTATGTTTGATATAGTCCTATATTTGAACAATTTTAGGGGGGGG
GGGCATGTGGTGTACACAGGGTCGGTCTCACGGGGGTGATATCCTCATGG
ATTATTAGAGTTGGACAAAGTTAGATATAAGTCGCACAATTTCAAAAAAA
TTCTCGTACCGGCCATAGGTGTACACAAAATTTCGAATAACTTTATTTTC
TGAACCTGTGGTTCAATTTCATCAAAGTAGTTAGAAAAAGTAAAAATATG
TAAAAACAAGTCTTATCCCGAAGTTGTTCTTATATTAACTCGTTTTGGAG
CCACGATCTTATATTATAATTTATGACCTTTGACCTCGGGATCAAATTTT
ATCTTTGTCAAATAAGATTCTTTTTTTTTGGGGGACTGAATACAATCTAC
ATTATTTTATGTATTGTATGGAGAGAATACATAATTTAATTTTGGCGATA
TTCTGAATTGAATTAGAAAGGAAAAACAGTCTATTATATAATTATAGACA
TTATATTATAAAAAAGGTCGGTTTAAAATTTAAAAGTTGTGTAAATTCTC
ATTCAAATAAATCCAAAGACTCAATTTCTTGGGAACCAATCATCAGATTT
AAAAAGTGAAAAAATAAGTTATATTTGGAGTTTGCTAGTAAAAATCTAAA
TGTAATTAAATCCGGACGTGGCCGGGTGAAAAATTGCCTTTTTGTGGGGA
TTTGATATGTAGTGAGCCAGTTATGAACCAATACTAACAAAACGAAATAA
AGTATAGGGAGAAAGTATTTTGCACTGAACCCCAAGCTTGGGCATTCAAA
TGTTATTACCGGGCTGTAAATTGAATAGCCCTGTTCTTAACCTTAACATA
TATGTTATCATTTAATAAAATTGTTTCTATTATTTCTGTTTACCTAATAG
AAAGTTCGAAGGAGCTTGAACTAAACTACGGAGCCCCAAGATTGTTAAAT
TCGATTTTCAATAAGATACTTGATCTAACGTTCCAAAAAGATGAACCAAA
ACCAACAAATGAACTATCACATTACAATGCACCACCATCCATTCCTTGTA
AATTTTAG
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