EMLSAT00000001011, EMLSAT00000001011-696858 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001011
Unique NameEMLSAT00000001011-696858
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:644091..644652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001011 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001011EMLSAG00000001011-683777Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004491EMLSAE00000004491-713419Lepeophtheirus salmonisexon
EMLSAE00000004492EMLSAE00000004492-713420Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779086auto779086Lepeophtheirus salmonispolypeptide
EMLSAP00000001011EMLSAP00000001011Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001011

>EMLSAP00000001011 ID=EMLSAP00000001011|Name=EMLSAP00000001011|organism=Lepeophtheirus salmonis|type=polypeptide|length=163bp
MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGN
CNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGG
GFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGFGNKGFRRPNGGGVSISNI
LKPRSNQNSDIVL
back to top

mRNA from alignment at LSalAtl2s116:644091..644652-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001011-696858 ID=EMLSAT00000001011-696858|Name=EMLSAT00000001011|organism=Lepeophtheirus salmonis|type=mRNA|length=562bp|location=Sequence derived from alignment at LSalAtl2s116:644091..644652- (Lepeophtheirus salmonis)
ATGATTTCCAAGATTTTAATTCTCTCCATTTTTGTGGCCTTTGGATCTGC
TCAAGACATTACACTCAAAGCACCTTCCCTCGCAGTTAATTGTGGATGCC
AATGCTCCAATTATATATTCAGAGATGGTAATGGAATAACACAAGGAAAC
TGCAACTCGTAAGTTGATCTTCTTTGATTTAGTTAGAAAGATGATTTTTA
TCTAAGAATACCCTTTTTTAATATTCAGAGCGGATAGAACCGGAGCAAAA
TTTTGCTATGTTGAGCCKGGCKARACTTGRCAAGATACAAGACGATCCGG
TCGTAGAGACAANTTTGGAAGATTCCGTCAAATTTCTAATGAAGCTTGCG
CTACTCCAAGATGTGGAGGAGGCTTTTTAGGAGGATTCGGAAATAATAAC
AACGGATTTGGAAACAARAATGGATTTGGAAACAARAACGGATTCGGAAA
TAACAACAATGGATTTGGCAATAARGGATTCAGAAGACCCAATGGWGGTG
GTGTCAGTATTTCTAACATCTTGAAACCAAGAAGTAATCAAAACTCCGAT
ATTGTTCTTTAA
back to top
Add to Basket