EMLSAT00000001042, EMLSAT00000001042-696889 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001042
Unique NameEMLSAT00000001042-696889
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1172supercontigLSalAtl2s1172:23884..25117 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001042 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001042EMLSAG00000001042-683808Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004614EMLSAE00000004614-713542Lepeophtheirus salmonisexon
EMLSAE00000004615EMLSAE00000004615-713543Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769647auto769647Lepeophtheirus salmonispolypeptide
polypeptide-auto769648auto769648Lepeophtheirus salmonispolypeptide
EMLSAP00000001042EMLSAP00000001042Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001042

>EMLSAP00000001042 ID=EMLSAP00000001042|Name=EMLSAP00000001042|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp
MGKKTKKDVVESPGYTVGALSQLISGNDDLPFKSLFATSNKQKEASLPCP
LTGSTNKNNHDVMTNEEVKEDDEVLEGEPQPVTPSLKRKAQLEDAKEFEM
DPEKEKRTLFIGNLCIKAKKKDLYRLFKPFGSXECVRFRGAARPDPKTLK
KVTVIRKLHHESRDNFLAYIRFKTPEEAESATKLNGTVYNDKTLRIDIAL
KDKVDQKKAVFVGNLDFSVNEEELRSHFLVCGAVSNIRLVRDKSTGIGKG
FGFINFMDSDGVLNALELNHTELKGRKIRVMRSSNRPKTLVNRKITKNSA
MTGSKSKPKVKSFSLYKKVNKNNDTKSFQGVSVTSDEKVTKKRKTKLEKK
NTLIAKKLINHKSTN
back to top

mRNA from alignment at LSalAtl2s1172:23884..25117-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001042-696889 ID=EMLSAT00000001042-696889|Name=EMLSAT00000001042|organism=Lepeophtheirus salmonis|type=mRNA|length=1234bp|location=Sequence derived from alignment at LSalAtl2s1172:23884..25117- (Lepeophtheirus salmonis)
ATGGGGAAAAAGACTAAAAAGGATGTGGTTGAGAGTCCTGGTTATACAGT
GGGTGCACTCTCCCAACTAATTTCGGGTAATGATGATCTTCCATTCAAGT
CTCTATTTGCAACAAGTAATAAACAGAAGGAGGCTTCTCTCCCATGCCCA
TTGACGGGCTCCACAAATAAGAACAATCATGATGTGATGACTAATGAGGA
AGTGAAGGAGGATGATGAAGTTTTGGAAGGAGAGCCTCAACCAGTCACTC
CAAGTCTAAAACGGAAAGCCCAATTGGAGGACGCCAAAGAGTTTGAAATG
GATCCTGAGAAAGAAAAACGAACACTATTCATTGGTAATCTCTGCATCAA
GGCAAAGAAAAAAGATCTGTATCGGTTATTTAAACCCTTTGGCTCCMTTG
AATGTGTTCGATTTCGAGGAGCTGCACGACCAGATCCAAAAACGTTAAAA
AAAGTAACTGTTATTAGGAAGCTTCATCACGAATCCCGTGATAATTTCCT
TGCATACATTAGGTTTAAAACTCCTGAAGAGGCAGAGAGTGCCACCAAAC
TGAACGGTACTGTCTATAATGATAAAACACTAAGGTAAACTCTGAGATAA
AAATTAATATTATATTATTCAATGTAATTTCATTACTTTCGATTGTTTCA
AATTAATTTCATTACTTTCTATTGTTTCAAATTAATTTCATTACTTTCTA
TTGTTTCAAATTAATTTCAGAATTGATATTGCTCTAAAGGACAAAGTAGA
TCAAAAAAAGGCGGTTTTTGTTGGTAATTTGGACTTTTCTGTGAACGAAG
AGGAGCTACGCTCTCATTTTCTAGTTTGTGGAGCAGTTTCAAACATACGA
CTTGTTCGTGACAAGTCGACAGGTATAGGGAAAGGGTTTGGCTTTATCAA
TTTTATGGACTCAGATGGAGTTCTAAACGCATTGGAGCTAAATCACACTG
AACTAAAAGGAAGGAAAATACGAGTTATGAGATCCTCAAATCGACCAAAA
ACGTTAGTGAATAGGAAAATAACCAAGAATTCGGCTATGACCGGATCTAA
AAGCAAGCCCAAGGTCAAGTCCTTCTCCCTCTATAAGAAAGTCAATAAAA
ACAATGACACAAAATCATTTCAAGGTGTGAGTGTCACATCAGATGAAAAA
GTTACAAAAAAGAGAAAGACGAAGTTAGAGAAGAAGAATACACTCATTGC
GAAAAAGCTCATAAACCACAAATCCACCAATTAA
back to top
Add to Basket