EMLSAT00000001086, EMLSAT00000001086-696933 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001086
Unique NameEMLSAT00000001086-696933
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:774552..775470 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001086 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001086EMLSAG00000001086-683852Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004766EMLSAE00000004766-713694Lepeophtheirus salmonisexon
EMLSAE00000004767EMLSAE00000004767-713695Lepeophtheirus salmonisexon
EMLSAE00000004768EMLSAE00000004768-713696Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779656auto779656Lepeophtheirus salmonispolypeptide
EMLSAP00000001086EMLSAP00000001086Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001086

>EMLSAP00000001086 ID=EMLSAP00000001086|Name=EMLSAP00000001086|organism=Lepeophtheirus salmonis|type=polypeptide|length=229bp
MEEVPSAGSSSSSSGSSTTPSHESSNTSSSSSHPNHFTSTPSSFRCSGEQ
VSPERCPSGAACKDLGVECLAWCXCPGDCIYGGQTNATCNVHHEIHCEGP
KTFNKLFTCQYCYQEPTNYVCSEKLDCDAVAQDPYYLSNCTVSQNVLCLG
RREFLKRKKCNWTGGYRWYAAVAFSVTLGGFGADRFYLGHWQEGIGKLVS
FGGLGVWTLVXXVLVAXXXIGPADGSLYI
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mRNA from alignment at LSalAtl2s117:774552..775470+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001086-696933 ID=EMLSAT00000001086-696933|Name=EMLSAT00000001086|organism=Lepeophtheirus salmonis|type=mRNA|length=919bp|location=Sequence derived from alignment at LSalAtl2s117:774552..775470+ (Lepeophtheirus salmonis)
GAGATCATGGAAGAAGTGCCCTCTGCTGGTTCATCCTCCTCTTCTTCAGG
CAGTAGTACAACCCCCTCTCACGAATCCTCTAATACTTCTTCCTCCAGTT
CTCACCCCAATCATTTCACCTCAACCCCTTCTTCCTTCCGCTGCTCCGGA
GAACAAGTCTCTCCAGAGCGTTGTCCCAGTGGTGCAGCGTGTAAGGATCT
AGGTGTTGAATGTCTTGCCTGGTGTCYCTGTCCAGGTGACTGTATTTATG
GTGGACAAACCAATGCCACATGCAACGTTCATCATGAGATCCATTGTGAG
GGGCCTAAGACATTTAACAAATTGTTTACGTGTCAGTACTGCTATCAAGA
GCCTACGAACTATGTGTGCTCTGAGAAGTTGGACTGTGATGCCGTTGCTC
AAGATCCATACTATTTGTCCAATTGCACTGTGTCTCAAAATGTACTCTGT
CTTGGAAGGAGAGAGTTTCTTAAAAGAAAGAAATGTAACTGGACGGGAGG
GTATCGATGGTATGCTGCCGTTGCTTTTAGTGTTACTCTTGGAGGATTCG
GTGCTGATAGGTATTTAGATAAAAAAACACCACAATATTAAAATATCTAT
ATATTTATTCAATCACATCTAAATTAAAATACATCTTAATAGGTTTTATC
TGGGACATTGGCAAGAAGGAATTGGTAAATTAGTTAGTTTTGGTGGTTTG
GGCGTTTGGACACTTGTGGWTGMCGTTTTGGTTGCTWTTCMCTKCATTGG
KCCTGCCGATGGATCACTTTATATCTAATTATGAGCTTTGACATGACTTG
TTTTTATTTTTGTATTCTTCATAGTTCGAGGTGAGGGTTTAGATGATGCA
GAGTGTTTTTTTGGACTTGCTTTACTCTTTTCAGATCCTAAAGGAGACAT
ATTCATCCAGTTAATTTTT
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