EMLSAT00000001431, EMLSAT00000001431-697278 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001431
Unique NameEMLSAT00000001431-697278
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1244supercontigLSalAtl2s1244:23497..23801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001431 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001431EMLSAG00000001431-684197Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006222EMLSAE00000006222-715150Lepeophtheirus salmonisexon
EMLSAE00000006223EMLSAE00000006223-715151Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769591auto769591Lepeophtheirus salmonispolypeptide
EMLSAP00000001431EMLSAP00000001431Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001431

>EMLSAP00000001431 ID=EMLSAP00000001431|Name=EMLSAP00000001431|organism=Lepeophtheirus salmonis|type=polypeptide|length=92bp
MSKGPSPFTFNRIKLCKDKTINVPNALIIKPFLQMHFTPFIIHQGNCILI
LAQGNLIEHYWGKLSSKTNVKPGMPIHDIALEKCPLIAKHFK
back to top

mRNA from alignment at LSalAtl2s1244:23497..23801-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001431-697278 ID=EMLSAT00000001431-697278|Name=EMLSAT00000001431|organism=Lepeophtheirus salmonis|type=mRNA|length=305bp|location=Sequence derived from alignment at LSalAtl2s1244:23497..23801- (Lepeophtheirus salmonis)
ATGAGTAAAGGGCCCTCACCTTTTACTTTCAACCGCATCAAACTTTGTAA
AGATAAAACAATCAATGTACCAAATGCCTTAATAATTAAGCCCTTCCTAC
AAATGCATTTTACTCCATTTATTATCCATCAGGGCAATTGTATTTTGATA
CTGGCTCAAGGGAAGTAATTAAAAAACAACTAAATAACAGTTTAATAGAA
CACTATTGGGGAAAACTTTCATCAAAAACAAATGTCAAGCCAGGAATGCC
CATTCATGATATTGCTCTTGAAAAATGTCCCCTCATTGCCAAGCACTTTA
AATAA
back to top
Add to Basket