EMLSAT00000001730, EMLSAT00000001730-697577 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001730
Unique NameEMLSAT00000001730-697577
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s129supercontigLSalAtl2s129:321159..324031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001730 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001730EMLSAG00000001730-684496Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007619EMLSAE00000007619-716547Lepeophtheirus salmonisexon
EMLSAE00000007620EMLSAE00000007620-716548Lepeophtheirus salmonisexon
EMLSAE00000007621EMLSAE00000007621-716549Lepeophtheirus salmonisexon
EMLSAE00000007622EMLSAE00000007622-716550Lepeophtheirus salmonisexon
EMLSAE00000007623EMLSAE00000007623-716551Lepeophtheirus salmonisexon
EMLSAE00000007624EMLSAE00000007624-716552Lepeophtheirus salmonisexon
EMLSAE00000007625EMLSAE00000007625-716553Lepeophtheirus salmonisexon
EMLSAE00000007626EMLSAE00000007626-716554Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776347auto776347Lepeophtheirus salmonispolypeptide
EMLSAP00000001730EMLSAP00000001730Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001730

>EMLSAP00000001730 ID=EMLSAP00000001730|Name=EMLSAP00000001730|organism=Lepeophtheirus salmonis|type=polypeptide|length=626bp
PVSDSSPIHDSEEDPSQGIPNEIQEEEEEDEDDVCECPSNKPRPNPCSST
SSLWTEEIVRDHDNFGTHENEDSLDAASNVSHCHNNSCNNHSASSTSTIS
TSLLLSSHKRKSGDIDSRPNRRFPSDRGEETESPVHKRPCVESIRRKLXL
GDRSHDPPPNPSPTPPPENPPPSPKAMKDWLSTFGXWSHVERLHALDNLI
ETCDPTQVRHMMQVIEPQFQRDFISLLPKELALYVLSFLDPRDLLRAAQT
CRYWRILAEDNLLWREKCREAGLKDVRDMMNKRRKLSSGFVHSACKTSYM
RQHNIEMNWRIRPIRPPKVLKGHDDHVITCLQFSNNRIVSGSDDNTLKVW
SATTGKCLRTLVGHTGGVWSXQMRDNIIVSGSTDRSLKVWNADAGTCVHT
LYGHTSTVRCMHLHENQVVSGSRDSTLRIWDIETGECLHILAGHLAAVRC
VQYDGRLVVSGAYDYMVKVWNPEREECLHTLSGHTNRVYSLQFDGIHVVS
GSLDTSIRVWDVETGACKHALMGHQSLTSGMELRNNILVSGNADSTVKVW
DITNGQCLQTLSGHNKHQSAVTCLQFNSKFVITSSDDGTVKLWDVKTGEF
VRDLVALESGGSGGVVWRIXVNLFEI
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mRNA from alignment at LSalAtl2s129:321159..324031-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001730-697577 ID=EMLSAT00000001730-697577|Name=EMLSAT00000001730|organism=Lepeophtheirus salmonis|type=mRNA|length=2873bp|location=Sequence derived from alignment at LSalAtl2s129:321159..324031- (Lepeophtheirus salmonis)
CCCGTCTCAGACTCATCCCCTATCCATGATTCAGAAGAGGATCCTTCACA
AGGAATCCCAAATGAGATCCAAGAAGAAGAAGAAGAGGATGAAGACGACG
TCTGTGAGTGTCCCTCCAACAAACCACGGCCGAACCCCTGTTCCTCCACT
TCCTCCTTATGGACGGAAGAAATCGTCCGAGATCATGACAATTTTGGAAC
ACATGAAAATGAAGACTCTTTAGATGCAGCCTCGAATGTGTCACATTGTC
ATAATAATAGTTGTAATAATCATAGCGCTTCTTCAACGTCTACAATATCC
ACCTCACTCCTTCTCTCCTCACATAAACGCAAGTCGGGCGATATTGATTC
CAGACCCAATCGCCGATTCCCTTCAGATAGAGGAGAAGAAACTGAATCTC
CTGTACATAAAAGACCATGTGTCGAATCTATCCGCAGAAAGTTGKCTCTG
GGAGATCGTAGCCATGATCCTCCTCCTAATCCATCACCTACTCCTCCTCC
TGAAAATCCTCCTCCATCTCCCAAGGCCATGAAGGATTGGCTTTCTACTT
TTGGCTGMTGGAGTCATGTTGAAAGACTGCACGCGTTGGATAATTTGATT
GAAACCTGTGATCCTACTCAAGTTCGGCACATGATGCAAGTGATTGAACC
TCAATTTCAGCGTGATTTCATTTCTTTACTTCCTAAAGAGGTAATTAATT
AATTAATTATTCATTCATGGATATGTATAGAATGGATTTTTTTAAAGCGT
GTCATCCCTTTTTCTTCTTCCTTATTTCTCTCTTTCTTTCTGCGTTGAGT
TTAAATCTCAACACTTTTCTCCTATATATTTTTCCACTCTCAATTCTACG
TACAGTAAATTTACCTGATAATTATTAAAATATTTATTTTTTCTTTTATT
TATTTTTTGAGGGTTCTCCTGTTACTTTTTAAATTAACGGGATTACATCA
AAACTTTCGGTTATTTTCAATTTTGAACGAGTGTTAGAAATGGTATGACT
AACTCTAAAATTAAGTACTCCCTTTTTATATCCACCCTACAAATAGACAT
CCTGTATTGAAATGAGGTGTTTCAAGTCTAAGTGAATCAAGAATGCAACT
AATTTTTATGGATAACATATCATGATTTGGGATAGTCTACTTCCCACGAA
CTATATTTTGTACTCGAACGTTTTAAATGTGGTATAAGTGTATTAATATG
TTGTATTTTTCCCATATTAGCTCGCATTGTATGTATTGTCTTTCCTCGAC
CCTCGAGATCTATTAAGAGCAGCGCAAACATGCCGTTATTGGCGAATCTT
GGCTGAAGATAATCTTCTTTGGAGGGAGAAATGCCGTGAGGCAGGCTTAA
AAGATGTTCGGGACATGATGAACAAAAGACGGAAACTTTCTTCTGGATTT
GTTCATTCTGCGTGCAAGGTATGGTGATTGATTTAAAATTGTATATCCTT
TTAATCAATTTTTTTTTTTAGACTAGCTATATGCGACAGCATAATATAGA
AATGAATTGGCGCATCCGTCCTATTCGACCTCCGAAGGTTCTTAAGGGTC
ATGACGATCATGTTATTACTTGTTTGCAGTTCTCCAACAATCGAATTGTC
TCAGGATCGGATGACAATACATTAAAAGTAGGTCGTCATCAATTTTCCTA
GAGTGTATAAAAATGCATTCACACAACTATTTGTCAAAATTGATTTCACT
TTTCAATACTCTGAAAGGAGATAAATTATTATAATATATGTACATTACTT
ACAAATGTATTATCTATGATTTTACTCAGGTATGGTCAGCGACAACGGGT
AAATGTCTTCGCACCTTAGTGGGTCATACTGGTGGAGTATGGTCGKCTCA
AATGAGGGACAACATTATTGTCAGTGGCTCTACAGATAGATCACTTAAAG
TCTGGAATGCAGATGCTGGAACTTGTGTTCATACTTTATATGGTCATACG
TCAACGGTTCGTTGTATGCATCTCCATGAGAATCAAGTTGTATCTGGTTC
TAGAGATTCGACTCTTAGAATATGGGATATTGAGACTGGAGAATGCCTTC
ATATTCTTGCTGGCCATCTTGCTGCTGTAAGATGTGTACAATATGATGGA
AGGCTGGTTGTATCTGGAGCTTATGATTATATGGTAAAAGTTTGGAATCC
TGAGAGGGAAGAATGCTTACATACGCTATCTGGTCACACAAATAGAGTTT
ATTCCCTTCAAGTATGGAAATATTCATTTTTTTCTTTTTGATTTTTCTAT
TGATTATTTTGTTGTTTTAATAGTTTGATGGGATTCACGTTGTTAGCGGG
TCATTAGATACGAGTATTAGAGTTTGGGACGTTGAGACTGGAGCGTGTAA
GCATGCCCTTATGGGACACCAATCCTTAACTTCTGGTATGGAGTTGCGTA
ATAATATTTTAGTGTCTGGAAATGCAGATTCAACCGTCAAAGTTTGGGAC
ATTACGAATGGACAGTGTTTGCAAACACTCTCTGGTAAGGATGTTTTGTA
TTCAAATTTTATACATTTTTATTTTTACAATTGAATTATTTAGGTCATAA
TAAGCATCAATCTGCTGTGACTTGTCTTCAATTTAATTCCAAGTTTGTCA
TAACTTCTTCAGACGATGGGACTGTTAAGTTGTGGGATGTTAAAACGGGT
ATGTACACATTTTTCCTTACAATTAATAAGGATACGTGTTTTTATGTTAT
TATTTCATTTTGTTTTAGGTGAATTTGTTCGAGATTTAGTTGCCCTTGAG
AGTGGAGGAAGTGGAGGGGTTGTTTGGAGGATANGGGTATGTACACWTTT
TCCTTACAATTAATAAGGATACGTGTTTTTATGTTATTATTTCATTTTGT
TTTAGGTGAATTTGTTCGAGATT
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