EMLSAT00000001968, EMLSAT00000001968-697815 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001968
Unique NameEMLSAT00000001968-697815
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s134supercontigLSalAtl2s134:815670..816916 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001968 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001968EMLSAG00000001968-684734Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008689EMLSAE00000008689-717617Lepeophtheirus salmonisexon
EMLSAE00000008690EMLSAE00000008690-717618Lepeophtheirus salmonisexon
EMLSAE00000008691EMLSAE00000008691-717619Lepeophtheirus salmonisexon
EMLSAE00000008692EMLSAE00000008692-717620Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779819auto779819Lepeophtheirus salmonispolypeptide
EMLSAP00000001968EMLSAP00000001968Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001968

>EMLSAP00000001968 ID=EMLSAP00000001968|Name=EMLSAP00000001968|organism=Lepeophtheirus salmonis|type=polypeptide|length=259bp
MWIIKLIFLFNLYGASQSFVSFRGDQVPQTWPNGVIPYHISSFFTKEEAQ
NIDNTLRQIESQSCIRFRPKQWYDWNSVFFQIGIKGCSTTGIGYHPFRGT
TTIYLKRPGCMSLRAISHEILHVLGFMHEQNRPDRDNYIQINWNNIESNP
RAYYQFARGKFPYEEMPECKTHLFYRLKPFVECYNGFETLTFGLPYDYKS
VMHYTAFAYSKNGEPTMTPKFPTSNRIGGSFIGLTSLDFQKLNRFYQCSY
NKIHFFHSN
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mRNA from alignment at LSalAtl2s134:815670..816916+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001968-697815 ID=EMLSAT00000001968-697815|Name=EMLSAT00000001968|organism=Lepeophtheirus salmonis|type=mRNA|length=1247bp|location=Sequence derived from alignment at LSalAtl2s134:815670..816916+ (Lepeophtheirus salmonis)
AAATTTACTTCCGTATAAGATATGTAGCTTTGAATCCCTCTTAGAAACTC
TCAAAGAATATTTTTTTTACTATGTTTGAAGCGCTCTTATGAGAAGTGTT
GTTTTAAATAAAGTTGTAAGATTTATATACTTACCAGACGACGAAATGGC
ATAGTTTTACTCAAAGGACAATGTGGATAATAAAACTGATTTTCTTGTTT
AATTTGTATGGAGCTTCACAAAGTTTTGGTAAGACATTCTCATCAGAAGT
ACCGTCTAAGGATCTTTCCTTTTTACCTTTAACTCAGTCTCATTTAGAGG
GGATCAAGTACCTCAAACATGGCCCAATGGTGTGATTCCTTACCACATTT
CTTCCTTTTTTACAAAGGAAGAGGCACAAAACATAGACAACACACTTCGT
CAAATCGAATCACAATCCTGCATACGATTTAGACCCAAACAGTGGTATGA
TTGGAACTCTGTTTTTTTTCAAATCGGAATTAAGGGATGCTCGACCACAG
GGATTGGATATCACCCTTTCAGAGGGACTACAACTATTTACTTAAAAAGA
CCCGGTTGTATGGTAAGTGTCTTATCAATTAAAGTTCTTACTAAATCCTT
TTAAAGTCTTTAAGGGCCATATCTCACGAAATTCTTCATGTCCTGGGCTT
TATGCATGAACAAAATAGACCTGACAGAGATAATTATATTCAAATCAACT
GGAATAATATTGAGTCAAATCCAAGAGCCTATTATCAGTTTGCAAGAGGA
AAATTTCCTTATGAAGAAATGCCCGAGTGTAAAACACATCTCTTCTATAG
GCTCAAACCATTTGTAGAGTGCTATAATGGTTTTGAAACCCTTACCTTTG
GTTTACCATACGACTATAAATCTGTAATGCACTACACAGCATTCGCGTAA
GTAAAGCAACTTCAAGTATACTAAACTTCCTTTCAATGAAAAAAACAAAC
AAAAATGATGTATTTTTATGTAGTTACTCCAAAAATGGAGAACCAACAAT
GACCCCAAAGTTCCCAACTTCGAATCGAATTGGAGGGAGCTTTATTGGAC
TCACATCTTTAGACTTTCAGAAATTGAATCGATTTTATCAATGTTCCTAT
AATAAAATACATTTTTTTCATTCAAATTAATATATATTTAAGTATGGGAT
GACAGTTGAACCAGGCAAAACTAAATAGAAGTTTACGAATGAATAGGACA
TAATATATTATAATTTCCTTATCATGCCTATTTAATAACCATATGAA
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