EMLSAT00000002032, EMLSAT00000002032-697879 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002032
Unique NameEMLSAT00000002032-697879
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
G F25 g6339_Cathepsin female
  1. PreAdult2
 No visible phenotype
-Missing- 		20.12.2012 - 10:57
29.01.2013 - 10:06
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s136supercontigLSalAtl2s136:1235703..1237501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002032 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002032EMLSAG00000002032-684798Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008966EMLSAE00000008966-717894Lepeophtheirus salmonisexon
EMLSAE00000008967EMLSAE00000008967-717895Lepeophtheirus salmonisexon
EMLSAE00000008968EMLSAE00000008968-717896Lepeophtheirus salmonisexon
EMLSAE00000008969EMLSAE00000008969-717897Lepeophtheirus salmonisexon
EMLSAE00000008970EMLSAE00000008970-717898Lepeophtheirus salmonisexon
EMLSAE00000008971EMLSAE00000008971-717899Lepeophtheirus salmonisexon
EMLSAE00000008972EMLSAE00000008972-717900Lepeophtheirus salmonisexon
EMLSAE00000008973EMLSAE00000008973-717901Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780551auto780551Lepeophtheirus salmonispolypeptide
EMLSAP00000002032EMLSAP00000002032Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002032

>EMLSAP00000002032 ID=EMLSAP00000002032|Name=EMLSAP00000002032|organism=Lepeophtheirus salmonis|type=polypeptide|length=321bp
MKILFNCLLVFQLFVFSFGVSIKVPLSRGSKIDNEFNMDRLNIDKLEFFS
EISIGTPPQLFNTVLDMESTNSWVPSSKCGSFNIPCTCTRVRIVGTKCVE
QQVFGEATSESLVPFGEAIYDGALGMGFSKDSNSFLNNLIDRNLIDEHLF
SIWLSRESVSKNNNGQLILGGIDSSYYSGNISYIPLNSDSMWRTKMNSIK
IKGIHRGCGYAGSPGCNVIFDAGTTQMAPTYGYYKVYCNAILSLPTIEFV
FDDQIFKLKPQDYIIETRILGMKVCLSGFVGLAKEKKPQWYLGSNFLSAF
YSVYDVENKKIGLATSSRGDN
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mRNA from alignment at LSalAtl2s136:1235703..1237501-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002032-697879 ID=EMLSAT00000002032-697879|Name=EMLSAT00000002032|organism=Lepeophtheirus salmonis|type=mRNA|length=1799bp|location=Sequence derived from alignment at LSalAtl2s136:1235703..1237501- (Lepeophtheirus salmonis)
ATGAAGATCCTTTTCAACTGTTTGTTGGTATTCCAACTATTTGTATTTTC
ATTTGGAGTATCGATAAAGTAATTAAGTAATGACCTATTAAGATGCTAAT
TTAAATTTTCAAAAAATTACAGAGTCCCCTTGTCAAGAGGATCCAAGATC
GATAATGAGTTTAATATGGATCGTTTAAACATTGATAAAGTAAGTAAGAA
ACAAATAGCTAGTCAAAGCACAAAACCTAATAACTAAAATGTTTTTTCAT
ATATACAACATTAGTTGGAATTTTTTAGTGAAATTTCCATTGGTACACCA
CCACAGCTATTTAATACTGTTTTAGATATGGAATCTACGAATTCGTGGGT
TCCATCTTCAAAATGTGGATCCTTTAACATACCCTGTAGTAAGTCCTAAA
CATAGATATTGATTGTAATTGATTCATAAAAACGATTTTCATTTAATATG
TATAAAGATACCCATAGCATGTACAAGAGTGAGAATAGTACTACTTATCA
AGAGAATGGAAGCAAGTTCGATGTTGAGTATAAAATTGGAAGTGTATCCG
GCTATTTGTCTAAAGATACATTATGTGTAAGTGTACAGAGTTTGTGTTGT
TTCAGTCTTGATTTATTCGGTGCAGTACAGTCTAAGCAACGGCTATATCA
GTCCTTGGGACTGGTCCTTAAGACTGTCAGTTCTAGAACTGATTAAAAAA
AAGAAGTTGAATGACGTCATCAAGGACCAAACTTTATAAGTTTTAGGACT
GAACTGGAACTGATCGAGACTGTACTGTACAGGACTGCAGTCTTTAGTTC
TAAATTAAGGCCGACACAACACTATGTACCTGGAGGTACTATAAATTTTT
TTCTTATAATACCTTTTGAAGCTACAATATCTGATTTTAAGAATGATTTA
CTAGCCAAATTTTCTTTTATATTCTATTAAGGTGGGTACGAAATGCGTCG
AACAACAAGTATTTGGAGAAGCAACTTCTGAAAGTCTAGTTCCATTTGGA
GAAGCTATTTATGATGGTGCCCTTGGAATGGGATTCTCAAAAGACTCAAA
CTCTTTTTTGAACAATTTAATCGATCGAAATCTAATTGACGAACACTTGT
TCTCAATTTGGCTTAGTCGGGAATCAGTATCAAAAAACAATAATGGCCAA
CTTATTTTAGGTGGAATAGATTCATCTTACTATTCAGGCAATATTTCTTA
TATCCCATTAAACTCTGATAGTATGTGGAGAACAAAAATGAACAGGTAAA
TTATATTTAAAGTATGTTTCGCACTCATTTACATATCTTCTTTCAAATTG
GCTTTACATTTCAGCATTAAAATCAAAGGAATACATCGTGGTTGCGGATA
CGCCGGTTCACCAGGTTGCAATGTTATATTTGATGCCGGAAGTAAGTWCA
TTTATGGACCATATTGGGAAACTAAAATAATTAATAAATGGCTCGGNAGC
AACGCAAATGGCCCCTACATATGGATATTATAAAGTATATTGTAACGCAA
TTCTTAGTCTTCCKACCATTGAATTCGTTTTTGATGACCAAATTTTTAAA
TTAAAACCACAAGACTACATTATTGAAGTAAATAATTTTATGTCTCTTCA
TATTCTTTATTTAAATTATGTTACCCTGTAGACAAGAATTCTTGGTATGA
AAGTTTGCCTCTCCGGATTTGTAGGCCTTGCAAAAGAAAAAAAACCACAA
TGGTATCTTGGATCTAATTTCTTAAGTGCATTTTATAGCGTGTATGACGT
TGAAAATAAGAAAATTGGCTTAGCTACAAGTTCAAGAGGAGATAATTAA
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