EMLSAT00000002228, EMLSAT00000002228-698075 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002228
Unique NameEMLSAT00000002228-698075
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1421supercontigLSalAtl2s1421:40295..41116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002228 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002228EMLSAG00000002228-684994Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009842EMLSAE00000009842-718770Lepeophtheirus salmonisexon
EMLSAE00000009843EMLSAE00000009843-718771Lepeophtheirus salmonisexon
EMLSAE00000009844EMLSAE00000009844-718772Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770278auto770278Lepeophtheirus salmonispolypeptide
EMLSAP00000002228EMLSAP00000002228Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002228

>EMLSAP00000002228 ID=EMLSAP00000002228|Name=EMLSAP00000002228|organism=Lepeophtheirus salmonis|type=polypeptide|length=173bp
MLFQFESSFSFDIYFKIHQKKTPSKIMKIFICLLALTATSLARPQQQDEF
FDPNPQYNFSYKVASDLTQTYINQDESRDGDFVTGEYSFVDPNGSLITVV
YEAGPEGYSETRTVQEGFVSISPENAGAGSTNVVDTRPAPRSGPGFDEDS
IIRKIVGGLTPLIEETVAEGLEN
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mRNA from alignment at LSalAtl2s1421:40295..41116+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002228-698075 ID=EMLSAT00000002228-698075|Name=EMLSAT00000002228|organism=Lepeophtheirus salmonis|type=mRNA|length=822bp|location=Sequence derived from alignment at LSalAtl2s1421:40295..41116+ (Lepeophtheirus salmonis)
CAACTATAAAAGGTCAATGTTGTTCCAGTTTGAATCATCATTCTCCTTTG
ACATCTATTTCAAGATACACCAAAAAAAAACTCCCTCAAAAATTATGAAG
GTAATCGTTTTTTTCTCCATGTAATTGAGTTGATATTAATTTGCTAGCCT
CCCCACACTCTTTATAGATCTTCATCTGCCTCCTTGCTCTAACTGCCACC
TCCCTTGCTCGTCCTCAACAACAAGATGAATTCTTTGATGTAAGACATCT
TTCATTCTAAACTCATCGTTTCATATCAAGTACTTATATACCTCTATTTT
TTCAGCCCAATCCTCAATACAACTTCTCCTACAAAGTTGCCTCTGATCTA
ACACAAACATACATAAATCAGGATGAATCTCGTGATGGTGACTTTGTCAC
TGGTGAATACAGCTTTGTAGATCCCAATGGAAGTCTTATCACTGTTGTCT
ACGAGGCTGGACCTGAGGGATACTCCGAGACTAGAACAGTACAAGAAGGA
TTTGTTTCCATTAGCCCTGAAAATGCTGGTGCTGGMTCAACCAATGTCGT
AGATACCCGACCTGCTCCAAGAAGTGGTCCTGGATTCGATGAGGATAGTA
TTATTCGTAAGATCGTCGGAGGGTTAACTCCATTAATTGAAGAAACTGTT
GCTGAGGGTCTTGAAAACTAAAAAGTCAGTCAGCTCRTATCAACTTAGTC
ACCACCACACCTCACCATGGGACATTTCCCATGAACAATCAKACTTTCTT
GAACTTACCACTGTATAATACTTGGATATTTTATTCCTCTAAATATAAGT
TTATTCCATTGTATAGTAAACA
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