EMLSAT00000002736, EMLSAT00000002736-698583 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002736
Unique NameEMLSAT00000002736-698583
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1588supercontigLSalAtl2s1588:75489..77910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002736 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002736EMLSAG00000002736-685502Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012151EMLSAE00000012151-721079Lepeophtheirus salmonisexon
EMLSAE00000012152EMLSAE00000012152-721080Lepeophtheirus salmonisexon
EMLSAE00000012153EMLSAE00000012153-721081Lepeophtheirus salmonisexon
EMLSAE00000012154EMLSAE00000012154-721082Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771458auto771458Lepeophtheirus salmonispolypeptide
EMLSAP00000002736EMLSAP00000002736Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002736

>EMLSAP00000002736 ID=EMLSAP00000002736|Name=EMLSAP00000002736|organism=Lepeophtheirus salmonis|type=polypeptide|length=506bp
MAPLKFRRLVSFSSEDRDKPACGLLSNKKWCCKDPGESSAWVIFELEGLA
KISAIDIGNFCSAFVEVQVSRSGSSDFRPLLPSSSFLNPVESRSMEHFER
VRMFSEDKFDISNSKDSWDLLKVICTQPFNKRTRYGLNFVTVNGMLDSKA
NLISSPKIHRIGSIILKDEEPYDETLKNGDLFAKRKIKIIDSSRKLSLSE
DMKSKESLASXSLAISQRKDKENETLRSKRMVDEENEERRKARKRKLDTI
DKLPSRKNEENSTPSTLNEHSEKHTLKKLRKKDPSTSCLSSTIKEESTNV
KTAPFRKLFSGVVFVISGFQNPLRSEIRSKALAMGAVYSGDWNTTCTHLI
CAFTNTIKKEASDPDEAQTSSPYMEDTDVEMSDYGSADESYKADTDVESP
ITENTKNISFPQLPDYFHDVVFYFYGPLENETLIKRIIVRAGGKVFPYMD
PQVNFVVSEKLWDDNFDIAVKVNPKMRFVIPEYIMKCFEGNTKLPTKLYR
TKEPIE
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mRNA from alignment at LSalAtl2s1588:75489..77910+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002736-698583 ID=EMLSAT00000002736-698583|Name=EMLSAT00000002736|organism=Lepeophtheirus salmonis|type=mRNA|length=2422bp|location=Sequence derived from alignment at LSalAtl2s1588:75489..77910+ (Lepeophtheirus salmonis)
GGGTAAGTATTCTTCTTAAATAATATTCAATTTTAGCGGGAAATGCAATC
AAAATATTTTGAAATGACGTCACTTGTTAATAGTAAACAGGACATTGCTA
TCAATACATTATACGGAAATTATTAGGTATAAAATATTAAATAAAACAAA
GTTAACGCATGAATGGCTCCGCTAAAATTTCGACGACTCGTGAGCTTTAG
CAGTGAAGATAGGGATAAACCGGCATGTGGACTACTTTCCAACAAAAAAT
GGTGTTGCAAAGATCCCGGAGAGTCCTCTGCTTGGGTTATCTTCGAACTC
GAAGGTCTAGCAAAAATATCTGCTATTGATATCGGTAACTTTTGTTCTGC
CTTTGTCGAAGTCCAAGTCTCTCGATCTGGATCATCTGATTTTAGGTAAT
TATAATTATAAAATTGAATGAATATTCCGAATGACAATTGTCTTTGCCTC
TGCCCTTCTAATTAATGTTAATGAGTCGTTATTGAAAGAAATCCTTACCT
CCTGCATTTTAGACCCCTTCTACCGTCTTCATCCTTCCTTAATCCCGTAG
AGTCTCGTAGTATGGAGCATTTTGAGCGAGTACGAATGTTTTCTGAAGAT
AAATTTGACATATCCAACTCCAAAGATTCCTGGGATCTCCTCAAAGTGAT
TTGTACACAGCCTTTTAATAAAAGAACCCGCTATGGCTTAAACTTTGTGA
CTGTAAATGGAATGCTAGATAGTAAAGCCAACTTAATTTCCTCTCCAAAG
ATTCATAGAATAGGTATYCAATGACATCCTTAGTACAAGAATTATCTTTT
AGATTAAAATAATTACTATCATCAAGTTTTAAATGTAAAGATATAAAATT
TAATTCACCCCTAATTATTGATTGAAGGTTCCATTATTCTCAAAGATGAA
GAACCTTATGATGAAACCCTCAAAAATGGGGATCTATTTGCTAAACGCAA
AATTAAAATTATAGACTCTTCTAGAAAGCTTTCCTTATCGGAGGATATGA
AGTCAAAGGAGTCTCTGGCTTCTTTMAGTCTTGCAATAAGTCAAAGAAAG
GATAAAGAAAATGAGACACTCCGCTCAAAAAGAATGGTGGATGAAGAGAA
TGAAGAAAGACGGAAGGCTCGTAAGCGCAAATTGGATACAATTGATAAGT
TACCGTCCCGTAAAAATGAAGAAAATTCGACTCCATCAACATTGAATGAA
CATTCGGAAAAGCATACTTTGAAAAAATTACGCAAAAAGGATCCAAGTAC
CTCTTGTTTGTCTTCAACAATAAAAGAGGAAAGTACAAATGTTAAGACGG
CTCCTTTTCGAAAATTGTTTTCTGGAGTTGTTTTTGTCATTTCGGGCTTT
CAAAATCCATTACGTAGTGAAATTCGGTCAAAAGCTCTTGCAATGGGAGC
TGTATATTCTGGAGACTGGAATACGACTTGTACTCACTTAATTTGTGCGT
TTACAAATACTGTAAGTCTTTTTAAATTCTTAAACCCGTTTTTTTTMTTG
TATAAATAGTACAATTTAATTTGACTTCATATTTTAACATAACAAMGAAG
ATGAATGATCTATTATTACTTTTTTTAAAGCCAAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAAAATAGTGAAGAAAGAATGGATTGAGGATGGAAATCAAGGAAGA
AAACGAAGTCATTGGAGAAAATACGCACTGGATCCTGCAGATAAGAAAGA
ACCACCGAGTGATGATGAGTACTTTGAAGAGACGATACAAGTTGTTGCCG
ATGCACATAAAAAAAGTCCAATTGCAACAAATGAAAGTGATTTTTCCCAA
AGCGAGGACAATGAGGCTTGTGATACGGACGYCGAAATCGATAATATAAT
ACAAAACCAAAGWAAAAAGATAAAAAAAGAAGCCTCTGACCCTGATGAAG
CTCAAACATCGAGTCCATACATGGAAGATACAGATGTTGAAATGTCTGAT
TATGGATCTGCTGACGAAAGTTATAAAGCTGATACTGATGTGGAATCTCC
AATCACTGAAAATACGAAAAATATATCCTTTCCTCAATTACCAGATTACT
TTCATGATGTTGTCTTTTACTTTTACGGTCCCTTAGAAAATGAGACGCTA
ATTAAAAGGATAATTGTTCGTGCTGGTGGAAAAGTTTTCCCATACATGGA
TCCTCAAGTCAATTTTGTAGTGTCTGAAAAGTTATGGGATGATAATTTTG
ATATAGCTGTTAAAGTTAATCCAAAAATGCGATTTGTTATACCTGAATAT
ATAATGAAGTGCTTTGAAGGCAATACTAAGTTGCCTACTAAGTTATATAG
AACGAAAGAGCCCATTGAATGA
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