EMLSAT00000003147, EMLSAT00000003147-698994 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003147
Unique NameEMLSAT00000003147-698994
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s175supercontigLSalAtl2s175:59197..61167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003147 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003147EMLSAG00000003147-685913Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013800EMLSAE00000013800-722728Lepeophtheirus salmonisexon
EMLSAE00000013801EMLSAE00000013801-722729Lepeophtheirus salmonisexon
EMLSAE00000013802EMLSAE00000013802-722730Lepeophtheirus salmonisexon
EMLSAE00000013803EMLSAE00000013803-722731Lepeophtheirus salmonisexon
EMLSAE00000013804EMLSAE00000013804-722732Lepeophtheirus salmonisexon
EMLSAE00000013805EMLSAE00000013805-722733Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770974auto770974Lepeophtheirus salmonispolypeptide
EMLSAP00000003147EMLSAP00000003147Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003147

>EMLSAP00000003147 ID=EMLSAP00000003147|Name=EMLSAP00000003147|organism=Lepeophtheirus salmonis|type=polypeptide|length=482bp
MANEKMDRKSRNLEPIGRQHGSSSSFSLLRAKMGEECRYVYWSRLRRKTG
AFLLFLMCFDSFISWVEAASKDSKGVDEHLKMGMTLLGKGQYSDALSHFH
SAIDADPNNYMSYYKRATVFLALSRSRSALXXLDRXLEINSNFLSARLQR
GTVLFKMGRLDEAHIDLEKLLTKDPGNEEASKKYIEIENLKTRVNMVHDL
MEYQNYKGVIDELNELIEHIPWDPTLREMRADAYIHIGNTFRAISDIRSV
TKLTSDNTDGYFKLADLYYQTGSTDESLHEVRECLKLDPEHRQCYPFYKT
LKKVVKFVNLAAESVESQDWAECINAANKILKIEPSVKNVRYIAYDRKCK
CLLENNEPKEAQNACSLALEINEEPRLYCDKAEAYLQEDLYNEAIEEYRK
ALNIEENFQRAKEGMLRAQKRQKQASKRDYYKILGLSRSASKRDVVKSYR
KLAQKWHPDNFQEESEKKAAEKKFMDIAAAKE
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mRNA from alignment at LSalAtl2s175:59197..61167-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003147-698994 ID=EMLSAT00000003147-698994|Name=EMLSAT00000003147|organism=Lepeophtheirus salmonis|type=mRNA|length=1971bp|location=Sequence derived from alignment at LSalAtl2s175:59197..61167- (Lepeophtheirus salmonis)
ATGGTAATTATTAAAGACATTCACGAATAGGTAGAAAAAAGAAATTCATT GAAAGAAGTAGAAGGTAAATATTCTGAATATCTAATGACTATGGTTTATT ATCTTTACTGTATTTTATGCTGAGTCTCAGTCTCTACGTACACATACGTA CAAACTATAATAGTGTTTTTACTCATTTTGTAGGCCAATGAGAAGATGGA CCGTAAGAGTAGAAATCTTGAGCCAATAGGAAGACAACACGGATCCTCTT CTTCTTTCTCCTTGTATGAATCACGCAACTTCTTCAACTCATTCCGGCTC GATTATTATAATTTATCAAAATATATATAACATGACAAGACTCTTAGGGC TTGACACTTAGTTGCTGACTTGTGAAGATTTCAATCGACTTGAAGATTTG AATTAGACTAAGGGCAAAGATGGGTGAAGAGTGTCGGTATGTGTATTGGA GTCGATTAAGACGGAAAACGGGTGCATTCCTTCTCTTTTTGATGTGCTTC GATTCATTCATCTCATGTAAGTTTGAGTTCTCTTGGATTTCATATTTATT CCAATGATGAAAAGACTCATGATCTGTACTCTTTAGGGGTTGAAGCGGCG TCCAAAGATTCCAAAGGAGTAGATGAGCATCTTAAAATGGGCATGACCCT CCTTGGGAAAGGGCAATACTCTGATGCACTCTCCCACTTTCATTCTGCGA TAGGTAAAGCTTTGACCATTCTTCCATTTCCGCATTGAGTCCCTTTGACA CACTCTTTCATTTTTATCTTACAGATGCAGATCCCAATAATTACATGTCC TATTATAAAAGAGCTACAGTGTTCCTTGCCTTAAGTCGAAGCAGATCTGC ATTGGYAGRTCTGGATCGAGKATTAGAAATCAACTCCAATTTTCTTAGCG CACGTCTTCAAAGGGGAACAGTGCTTTTCAAGATGGGACGCTTGGATGAA GCTCATATAGATTTGGAAAAGCTTCTTACTAAAGATCCTGGCAATGAGGA AGCCAGCAAAAAATATATAGAAATTGAGAATTTAAAAACAAGGGTGAATA TGGTTCATGATCTAATGGAGTATCAAAATTATAAAGGTGTAATAGATGAG TTAAATGAACTGATAGAGGTATTCATTTTCCCCCACAAGTATGCAATTAT GTGTAAATGACTATCGATTGCTCTTTCAGCACATCCCTTGGGATCCTACT CTTCGTGAAATGCGGGCTGATGCATACATTCATATTGGTAATACATTCCG TGCCATTTCTGATATTCGCTCTGTAACAAAATTGACTAGTGATAATACTG ACGGATATTTCAAGCTTGCTGATCTTTATTATCAAACGGGTTCAACGGAC GAATCTCTACATGAAGTAAGAGAGTGTCTCAAATTGGATCCTGAACATCG TCAATGTTACCCATTTTACAAGACACTAAAAAAAGTTGTTAAGTTTGTTA ATTTAGCTGCAGAATCTGTAGAGAGTCAAGATTGGGCAGAGTGTATTAAC GCTGCTAATAAAATTCTAAAGATAGAACCATCCGTCAAAAACGTTAGATA TATTGCGTATGATCGCAAATGCAAATGCTTACTTGAAAATAATGAGCCCA AAGAGGCACAAAATGCATGTTCACTTGCTCTCGAGATCAACGAAGAACCT AGACTTTACTGTGATAAAGCAGAGGCTTATCTCCAAGAAGATCTCTATAA TGAAGCAATTGAAGAATACCGCAAAGCTTTAAATATTGAGGAAAATTTCC AACGAGCTAAAGAGGGAATGCTTCGTGCTCAGAAACGACAAAAACAAGCT AGTAAAAGAGACTATTATAAAATCCTCGGTCTCTCTCGGTCTGCATCCAA AAGAGATGTCGTTAAATCCTATCGAAAACTTGCTCAAAAGTGGCATCCAG ATAATTTTCAGGAAGAAAGTGAAAAGAAAGCGGCTGAAAAAAAATTTATG GACATTGCTGCAGCAAAGGAA
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