EMLSAT00000003189, EMLSAT00000003189-699036 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003189
Unique NameEMLSAT00000003189-699036
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s176supercontigLSalAtl2s176:671224..672666 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003189 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003189EMLSAG00000003189-685955Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013963EMLSAE00000013963-722891Lepeophtheirus salmonisexon
EMLSAE00000013964EMLSAE00000013964-722892Lepeophtheirus salmonisexon
EMLSAE00000013965EMLSAE00000013965-722893Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779252auto779252Lepeophtheirus salmonispolypeptide
EMLSAP00000003189EMLSAP00000003189Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003189

>EMLSAP00000003189 ID=EMLSAP00000003189|Name=EMLSAP00000003189|organism=Lepeophtheirus salmonis|type=polypeptide|length=319bp
MEYHENLCIKWNEYESNLKEGLSELLHNEELFDVTLISGSRVIKAHKVIL
SACSPVFRSIIQSVSFHPHPVIYLKDINFDHLELILSFLYYGEMRVASDE
INDLLCVADVFQIKGLYNNTITSATINGEDIFIQSNSDLYSSINKSFQHQ
SCNTNPNKECQDIFAPNSSLNTKRENPDESFLYSLESSYNPDLVDGVQSN
CDGDVSYDMANSSSRYLNNACGREAEGANISTKDDNEKYHQSLKPEIKKH
FKKSINKGFECKKCKFTTFDRTCINRHIEYRHMITKGFCCHVCNKNYKTI
CTLKRHNTHFHKRESDVIM
back to top

mRNA from alignment at LSalAtl2s176:671224..672666+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003189-699036 ID=EMLSAT00000003189-699036|Name=EMLSAT00000003189|organism=Lepeophtheirus salmonis|type=mRNA|length=1443bp|location=Sequence derived from alignment at LSalAtl2s176:671224..672666+ (Lepeophtheirus salmonis)
ATGGAGTACCACGAGAATCTCTGTATTAAATGGAATGAATATGAATCTAA
CTTAAAAGAAGGTTTATCTGAGCTGCTACACAATGAAGAACTCTTTGATG
TGACTCTTATATCTGGTTCAAGAGTAATCAAGGCTCACAAGGTGATTCTT
AGTGCTTGTTCCCCCGTATTTCGCTCCATCATTCAGTCCGTATCTTTCCA
TCCACATCCTGTGATCTACCTGAAAGATATCAATTTTGACCATCTGGAAC
TAATCCTGTCGTTTTTATACTATGGAGAAATGAGAGTGGCCTCAGATGAA
ATCAATGATTTGCTTTGCGTAGCAGATGTGTTTCAAATCAAGGGGCTTTA
CAACAATACTATTACTAGTGCCACTATTAACGGAGAAGACATTTTTATTC
AATCAAATAGCGTTGAGAAATCTCAGCAGAATTATTCAATCGTANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGAAGAAAACAAATCCTCAAGCTGTACTCTTCATCC
TTCAAAATCAAAGGATTTGTATTCCTCAATTAATAAAAGTTTCCAACATC
AATCATGCAATACTAATCCTAATAAAGAATGTCAAGATATATTTGCACCT
AATAGTTCATTAAATACGAAGAGAGAAAATCCTGACGAATCATTTCTGTA
CTCATTGGAATCCTCATACAATCCAGATTTGGTAGATGGAGTCCAGAGTA
ATTGTGACGGTGATGTTAGTTATGATATGGCAAACTCTAGCTCAAGATAT
TTAAATAATGCTTGTGGAAGGGAAGCTGAAGGTGCGAATATTTCAACTAA
GGATGATAATGAAAGTATGCTCGTTTACGGTTGAATTTATTCATTATATT
CTGTTTTACCATTTTTTTATTCCAGAATATCACCAATCTTTGAAGCCTGA
GATTAAAAAACATTTTAAGAAAAGTATAAATAAAGGATTCGAATGTAAAA
AATGTAAATTTACTACATTCGATCGTACCTGTATTAACCGTCATATAGAA
TATAGGCACATGATTACGAAGGGCTTTTGCTGTCATGTTTGCAACAAAAA
TTACAAAACAATATGTACACTCAAGAGACACAATACACATTTTCATAAGC
GTGAAAGTGACGTTATTATGTAGTCACTATTGTATAATTATATCCTTAAT
TGAATCAATTTATATTTAGGAGGCCAAGAGACTTTCACTATCAAGTATAT
GTATTATTATTTGTTTTCATCTGTGAACGCGTTGGTTCTGCAGATTCTCA
ATATGTAAAATGTTTATATTTGCAGGATAATAAAAAATTACTATTTGAAA
ATAGAGTGGATGTATTTATGCATAAATACGAATTTATAGGAATGTACAAT
TCCTAAATTTATTATATCTATTGAATTTTTCTCTTGATTGAAT
back to top
Add to Basket