EMLSAT00000003222, EMLSAT00000003222-699069 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003222
Unique NameEMLSAT00000003222-699069
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s177supercontigLSalAtl2s177:50291..51169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003222 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003222EMLSAG00000003222-685988Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014105EMLSAE00000014105-723033Lepeophtheirus salmonisexon
EMLSAE00000014106EMLSAE00000014106-723034Lepeophtheirus salmonisexon
EMLSAE00000014107EMLSAE00000014107-723035Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770656auto770656Lepeophtheirus salmonispolypeptide
EMLSAP00000003222EMLSAP00000003222Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003222

>EMLSAP00000003222 ID=EMLSAP00000003222|Name=EMLSAP00000003222|organism=Lepeophtheirus salmonis|type=polypeptide|length=254bp
MSLLNSINSVTTTMNTTTNHLLNLLLVLLLNKIYSIHTSFMAQHPAINTL
LSTYNKVTPPYPENKGVIFLYLSLTPICFELTEEGDLEGTVWYHWKWEDS
RLKWIDDTSNEVLVPKRLIHIPGILPISKYVREXFDHRELATIYRNGTVF
LNQRVRIKVPCDGYTWDNPWDIMNCSFTYTPWTHNSATIDLRKLGETDSV
DLSKYDNENCPVKLINGETKLWSEYYGHQNYGYLYIKYLFLLQRNWLVQS
YDKH
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mRNA from alignment at LSalAtl2s177:50291..51169-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003222-699069 ID=EMLSAT00000003222-699069|Name=EMLSAT00000003222|organism=Lepeophtheirus salmonis|type=mRNA|length=879bp|location=Sequence derived from alignment at LSalAtl2s177:50291..51169- (Lepeophtheirus salmonis)
ATGTCACTTCTCAACAGTATAAACAGTGTAACTACGACGATGAATACGAC
GACAAATCATCTTCTCAATTTGCTTCTAGTCCTTCTCCTAAATAAGATAT
ATTCAATACATACGAGCTTCATGGCTCAACATCCCGCAATTAATACCCTA
TTGAGCACCTACAACAAAGTCACACCTCCTTATCCTGAGAACAAAGGAGT
GATATTTCTATATCTGAGCCTAACACCGATTTGCTTCGAGTTAACCGAAG
AGGGAGATCTAGAAGGAACTGTCTGGTATCATTGGAAGTGGGAGGACTCA
CGATTGAAGTGGATAGACGATACATCAAATGAAGTGCTAGTTCCAAAGCG
TCTAATTCATATTCCAGGAATCTTACCCATCTCAAAGTAAGGCTGTTAAG
CAAAATCTCCAATTTCTACTTCTTGTTAACATAGGTATGTTCGAGAGMCT
TTCGATCATCGAGAATTGGCAACTATCTACAGGAATGGGACCGTGTTCCT
TAATCAAAGAGTCAGAATCAAAGTACCCTGTGATGGATATACTTGGGATA
ATCCTTGGGACATCATGAATTGTAGTTTTACATACACTCCCTGGACTCAC
AATAGCGCCACCATAGACCTCCGAAAACTGGGTGAAACAGACTCGGTTGA
TTTGAGCAAGTATGACAATGAAAACTGTCCTGTGAAAGTAAATGTTCTCA
ATCATCAAAATGATAGTTATACGACTTAATTAACTAATTTTGCGTCTCTG
TTTCAGTTAATCAATGGTGAAACAAAACTATGGTCGGAATATTATGGACA
TCAGAACTATGGCTACCTCTATATCAAGTATCTGTTCCTTCTACAAAGAA
ACTGGTTAGTCCAAAGCTATGATAAGCAC
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