EMLSAT00000003491, EMLSAT00000003491-699338 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003491
Unique NameEMLSAT00000003491-699338
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s190supercontigLSalAtl2s190:393583..394810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003491 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003491EMLSAG00000003491-686257Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015176EMLSAE00000015176-724104Lepeophtheirus salmonisexon
EMLSAE00000015177EMLSAE00000015177-724105Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777218auto777218Lepeophtheirus salmonispolypeptide
EMLSAP00000003491EMLSAP00000003491Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003491

>EMLSAP00000003491 ID=EMLSAP00000003491|Name=EMLSAP00000003491|organism=Lepeophtheirus salmonis|type=polypeptide|length=65bp
KLYFDRCIPKIKRSKGIYSLSFSLFLLLLLLFSLSFSLPSLSFSRFFLYV
VQSSWKCSLQTILLL
back to top

mRNA from alignment at LSalAtl2s190:393583..394810-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003491-699338 ID=EMLSAT00000003491-699338|Name=EMLSAT00000003491|organism=Lepeophtheirus salmonis|type=mRNA|length=1228bp|location=Sequence derived from alignment at LSalAtl2s190:393583..394810- (Lepeophtheirus salmonis)
AAATTGTACTTTGACCGTTGTATTCCTAAGATTAAAAGAAGTAAAGGGAT
TTACTCGCTCTCCTTCTCTCTCTTTCTCCTCCTTCTTCTCCTTTTCTCTC
TCTCTTTCTCCCTTCCTTCGCTTAGCTTTTCCCGTTTTTTTCTGTATGTG
GTTCAGTCCTCTTGGAAGTGTAGCCGTAAGTACCTCTCCTTGTTCCCTAA
CAATATTTTTCTCGTTAAGTCTGTCTGTGTGTCTTTGTCCCTTACTCTCC
CTTCCCCACCTCTCTCTCTTTTTCTGTTCCTCTCTTTCTCTTCCTGTCTT
TCCTTAACTATTCTGCTCTTCAACATTATTAGTCATTGAATTGACGAAAG
ATCTAATTAAGTGCGTCACTCAAGTGTCTTCAATATCTGTTTTTACTCAT
TGAATTTAGCAATGGTATATTTGACGTGATTTCTAACTCTGGAACTTAAT
TTTGCTAAATTGAGGGAGTTGTAGGAGGTGTAACTGGGGTAGATTCCTCC
TCCTTTGACTGTTGTACAAACTGAGCCCCCACGGGGGAGATTCCCATAAT
TGGGATGAGCATTGTTTTTATGCTATTTGTGTATACTAATGTTGGGATGA
ATGTCTGCCTCTGGTAGGGATTTTTTTCTTTCCAAACGTGGGGTATTTTC
TGAGTTGCGGTGGTGGGMGTGAGAACTGATTTTGTAGTGGGGAGATGTGA
AGTGAGTCAAAGAGTCTGAGGGAGACTCCTTTTTGTAGCGTCTTCAGTTC
CTATGCTAGGAGTAAGGATGAGTGTAATTGGAAAAGAAAAGTATGAGGCG
AATTACTATCCAGGGAAAAATGAAAGTGCTCCTCCCTCTTTAATACTTGG
GAATTTTCAAAATGAGGAACAATAAGAAATATTGTACTTTGTCATAGTGT
ATTTTGATATCCCTAGCCCTATCCCTCACTCCTGACCTTGGTTGGGATGA
TTTTATTGAGTGACCTAGTTTTCGCTTTCCTTAGTGGAATGAGCTTGGTT
GCTCCTTGCGACTTTCCTCTCAAGTGGGCTTTCCCTCTTGTGCTCAAGTA
CTCCTTTCCCAGGCTGAAAGGGACTGGAACTAAATGGAAAAGGGCTCCTT
TTTATTTGTTTGTTTTTCTATTGCCCCTCTATTGAGTTGTTAACTCGAAT
CCTTAGCCCCTCTTGATTGATTCACTTCTTCTAATTCTACTTTTTCTTTT
CTTTTTAGTTCAAACAATACTATTGTTG
back to top
Add to Basket