EMLSAT00000003815, EMLSAT00000003815-699662 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003815
Unique NameEMLSAT00000003815-699662
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:388408..390806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003815 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003815EMLSAG00000003815-686581Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016589EMLSAE00000016589-725517Lepeophtheirus salmonisexon
EMLSAE00000016590EMLSAE00000016590-725518Lepeophtheirus salmonisexon
EMLSAE00000016591EMLSAE00000016591-725519Lepeophtheirus salmonisexon
EMLSAE00000016592EMLSAE00000016592-725520Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777159auto777159Lepeophtheirus salmonispolypeptide
EMLSAP00000003815EMLSAP00000003815Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003815

>EMLSAP00000003815 ID=EMLSAP00000003815|Name=EMLSAP00000003815|organism=Lepeophtheirus salmonis|type=polypeptide|length=312bp
MKSFHTIIFIETNKDCPLISDLQNILNEIINEGLLDSILPYIEPSSHYPS
PCSSAXLPASQDTSVFVTHEEGRLTSSAKSRGRKSKFKPSSSSFLDSELH
RQRQSIPISEMKPKNHGRDVTIHVCDEVQNMKKDFTCPQHLLLSQMGYFK
DITSGQCLEDLDISVHCDVFIFEWLISWIKEDEKPELEPENVISILISAD
FLKISPLVETALSYVHRNMNKVLSVTTNLSCLSDHLLNRLSELYKPSEVE
MILDRKDRIQSRLYSKLIQRLCAILPQYDREILDTAFSLHRCELCGLFLT
SSSAKTLPLSEH
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mRNA from alignment at LSalAtl2s206:388408..390806-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003815-699662 ID=EMLSAT00000003815-699662|Name=EMLSAT00000003815|organism=Lepeophtheirus salmonis|type=mRNA|length=2399bp|location=Sequence derived from alignment at LSalAtl2s206:388408..390806- (Lepeophtheirus salmonis)
ATGAAATCCTTTCATACCATTATATTTATTGAGACAAACAAGTAAAGTTC
CGTTCTATTTATAGTTAAATATCTTTTATTTTTGCCAAATGACAAAAATA
AAAAAATATATTTAACCAAATAAACCTGTCGAATTGTATGTCATGTTTTC
TTTCTATATTGGGGATGTACTAAAAAACTTAAAGATTTATTTACTGCAAT
TTCTTTTTCAAAACGGATAGGGATTGCCCACTCATCAGTGATCTTCAAAA
CATTCTCAACGAAATCATCAACGAGGGTCTCCTCGACTCCATTCTTCCTT
ACATAGAACCCTCTTCACATTATCCTTCCCCCTGTTCTTCTGCAMCTCTT
CCAGCCAGTCAAGACACCTCTGTATTTGTTACCCATGAAGAAGGACGATT
AACCTCCTCTGCTAAGTCTCGAGGACGAAAATCCAAATTCAAGCCCTCTT
CTTCCTCCTTTCTAGATTCAGAGCTACATCGACAACGGCAATCCATTCCT
ATCTCTGAAATGAAACCCAAAAATCATGGTAGAGACGTTACCATCCACGT
CTGTGATGAAGTTCAAAACATGAAAAAGGACTTTACTTGTCCTCAACATC
TATTATTATCACAAATGGGATATTTTAAAGACATTACGTCGGGACAATGC
CTAGAGGATTTGGATATCTCTGTGCATTGCGATGTTTTTATTTTTGAATG
GTTAATTTCCTGGATCAAAGAGGATGAGAAACCCGAGTTGGAGCCAGAGA
ATGTAATATCTATACTCATTTCTGCGGATTTTCTTAAAATCAGCCCCCTT
GTGGAAACGGCTCTTTCCTATGTTCATCGAAACATGAACAAAGTTCTTAG
TGTGACAACAAACCTCTCCTGTCTAAGTGATCATTTGCTAAACAGGTAAT
GAATAAAAATAGCTGCCTTCAAACTACCTCTATTAGGAAATGTAAATCAA
AATAAAATTATGTGGAAAAATAGGATTGCCCTATTTACATACATACATAT
ATCCAATAACCATTTATGCTTTCATCCAATAATTTGTATTTTTTTGTATG
TCCTTGACTTGCTTCCTCTTTGTATTACTTTACTTTCATGAATATAAAGA
TTATCAGAGCTTTACAAGCCTTCTGAAGTTGAAATGATACTAGATCGAAA
GGATCGGATTCAAAGTCGACTCTATAGCAAATTAATTCAACGACTCTGTG
CTATTCTACCTCAATATGATCGGGAAATCCTGGATACCGCGTTTTCTTTG
CATCGATGTGAACTCTGTGGGCTCTTTTTAACCTCTTCTTCAGCCAAAAC
TCTTCCTTGTCTTTCCTTTCGATCCAAGATTGACCATAGGGGCAACATTG
TTCCAATTCATAAGCGGTAATATTTTTTTAACTTTAACATACTCTATAAA
AAAGTAGCATATAATATATTGTATACATTTGTTGTGAAGAAGTTGTAGCT
TGTATAAGCAGGCTGTGCAATTTACAATTTCAACGTCTTATCACACTTTA
TTTTATTACAACATAAGCCATTTTAACTATTATTATTTATGAATACTATA
ATTTAAGTAAGGAAAATTAAAACTATGCATAAATTACGTATTTACGAGTA
ATATATTTATGGACGATCAAGGGTGCCACAGGATTTCGTTTTTGGAGTTT
TTACAAAAAAAACCAGGCACGTTATATTTTTATAGTATTTTCGTATGATT
AAACATATTTGTGCACAATGTGCTAMARAAGCCATATGTCTTAAGGTTTA
ACTTTTCTCATGTAACTTTACTATATTTTTTTTTGGAAAAACAATTCAAA
AACCCATACATATTCGCAAAAAAATCAAAAATCCATATCTCTTTATAAAA
GTTTAATTTTTTTTTTTTTTTTTAAATTCAAAAATCTATAGTTATTCTCA
AAAAAATTAATTTCTTAGGGAAATAAATTCAAATAAAAATATTACAAAAA
ATTRAATTTATKGGAAAAKAATCTAAAATATGAANNNTTATAAAAGTTTA
ATTTTTTTTTTTTTTTTTTAAATTCAAAAATCTATAGTTATTCTCAAAAA
AATTAATTTCTTAGGGAAATAAATTCAAATAAAAATATTACAAAAAATTA
AATTTATGGGAAAATAATCTAAAATATGAAAATTTTTGGACAAAATTTTC
GAAAAACCACAGTTGTTTACAAACCCCTAATTTTTTTAGAAAAAAATTTC
AAAATCTTAATTTATTCTTAATTTCTTTTTTTTTTAATTTCTAATATAAA
ATTTTTGGATTTTGTTTTTAAATTAAATGTTTTATGAAAAAATGTAATAC
CGTTCTAAAAGTATGTCGTTCATGTATACGGAACAAAAGTAGCTTCATGT
ATGTTTTATTTTTTTTGCATAAAACTACTTTTAAGTGTCAGAACATTAA
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