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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s211 | supercontig | LSalAtl2s211:1171608..1176486 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003918 >EMLSAP00000003918 ID=EMLSAP00000003918|Name=EMLSAP00000003918|organism=Lepeophtheirus salmonis|type=polypeptide|length=1623bp
MGYEKEEYERDIHDQGPLLGKSGKLMDEEREKQLAYEYLCRLEEVRRWVE
SCIHESLPSPTEFESQLRNGILLAKLAHFFAPEVVSLKRIFDPLGEKYEE
SGLHFRHTDNINHFLRACSEIGLPSIFTPETTDVYDAKNLPRVVFCLHAL
SLFLFKIGMAPEMMDLGGKATFTPQELSQTQAALKELDSPMPQFHRLNKD
PSLASPVRLPRIENIDSHQKLRSALQDFDRIQDEAIVRYHMRFRKNRDRN
TPLRPAEIQNIIDEVNVLVELEEVIKYKKANDLREALEPWKLRVDFDVSK
TEMYLEFLYHALLALDGEEELKKETIEAAMMEANRRDHEHSYKESVTRLN
EALRGDDISATLDYLRRLDVPFHSFAGNLYHDELRYILVETGRDLKRDSV
LSLVQFLNNVASVNQAVRFRNVEETWRTLTLKNTNIEDLDSDLKENYLEA
LSCALESKDGMLLTHFEIQDAVDAVNKSTSDDIIEALQNINSALKRKDPS
LLYKSLTNPVLKLETIEEDDATHTLDLLEQIAVNRSILEHEESEIWVDNV
FDAVHQTIQHTKEATDAGFALSIANMAIQQGDHAHTFETLNHPSLFLTDY
LIKEHSKTYQERLLQRFNEKEAEGTTPWVKHALSDGHGFVYLNLKEHIYS
WTQPEEVHSSSTFLDYQDILDILEHVNRLGGVIKDYDQLDFKLVFVGTLS
DNDCFXMLQHYYDNVDSIIKVQAHVRGHQTRKRFKDALAQLRRNRSPVLK
PIASYLPYEEGIIKIQRAWRKHKKAIDLQALMKVDTQGKINLNVVRKYLY
LLDHSMEDFDQELNLQSLKGNITKVIRFNQNLEKNLDVMDIKIGLLVKNR
ISVEEVVAHSKTLNHHSNNHHRASTLNLLRNDDDTNNNNSNSNHGLKALK
KESRTKLDAYQNLFYYLQTNPQTLAKLIFAMPQLKTTKFMESVILSLYNF
GANQREEYLLLKLFQTALEEEVRCKVDKPSDIITGQPMVIKMIVSFYRNG
GKGSNSLREMLGTIILRVLEDKNLSINTNPVEIYKQWVNSKEFESGQASG
MPYDVTPQEALSHEEVRKRLNRSVIKLKQVTTMFLATILSSRHKIPYGML
YMAXXLYVSLKKKFPSIQQKEILKVVGNLLYYRFINGAIVAPDAFDIIGV
SADNILNNEQRRNLGSISKILQFAASKKGYGEESSHLMCLNGYIIECHEK
FKKFFLQCVDEVVSPEEEFNMDQYYEAXLIAKPVIFISLQEIVDTHQLLL
DFQDTVAPDTSDPLHELLDDLGDGGPSLCSLLGVASASTNASLGNLGTSE
VCLTLTNKFELSGFDRSDTEELFIKTKHLIMSILPCTKEGNLIGCLKSET
TQEFETLYWQLVNQKEEEEKEATRNKSMLDHTNPFINDECRLPLADCKRQ
ILKNLMVLEXAGLVTSKDGCKSLINSIIKSILNRRQYRLRRQREIFRLNL
TLKSLKLKKKFLEEQVEYYDTYLKQCLKNLQVNKRRRVHFQQPLKKSSPS
SNSQTVSESHHHHRWGTRMKSRSTLRYSASRLHEKGVLLAIDGLPPSQFK
NVQFEIVPTENDGVFEVHAKFMGVRLEHVDVNIQDLLQFQYEGVSVMNMF
GKANINVNLLLHFLNSKFYGRKK back to topmRNA from alignment at LSalAtl2s211:1171608..1176486- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003918-699765 ID=EMLSAT00000003918-699765|Name=EMLSAT00000003918|organism=Lepeophtheirus salmonis|type=mRNA|length=4879bp|location=Sequence derived from alignment at LSalAtl2s211:1171608..1176486- (Lepeophtheirus salmonis)
ATGGGCTACGAGAAGGAAGAATACGAGAGGGATATCCATGATCAGGGGCC
CCTCTTGGGGAAATCTGGGAAGTTGATGGACGAAGAGCGAGAAAAGCAAT
TGGCTTACGAGTATCTTTGCCGTTTGGAAGAGGTTCGTCGATGGGTGGAG
TCCTGCATCCATGAATCTCTCCCCTCTCCTACTGAGTTCGAATCCCAGCT
ACGAAATGGGATTCTCCTCGCTAAATTGGCTCACTTCTTCGCCCCAGAAG
TGGTTTCCCTCAAGAGGATATTTGATCCCTTGGGCGAGAAGTATGAGGAG
TCCGGACTCCACTTTCGACACACGGACAATATCAATCACTTTCTGAGAGC
CTGTTCTGAGATTGGACTTCCGAGCATATTCACTCCTGAGACGACGGACG
TGTACGATGCCAAAAACCTTCCTCGTGTCGTCTTCTGCCTCCACGCACTG
AGTCTCTTTCTCTTCAAAATTGGAATGGCTCCCGAAATGATGGATCTGGG
TGGAAAGGCGACGTTCACTCCGCAAGAACTCTCCCAAACGCAGGCTGCTC
TCAAAGAGCTGGACTCTCCCATGCCACAGTTCCATCGCTTAAATAAAGAC
CCAAGCCTTGCTTCTCCGGTTCGTCTGCCTCGCATTGAAAATATTGATTC
ACATCAAAAATTACGCTCTGCTCTTCAAGACTTCGATCGGATTCAAGATG
AGGCTATCGTCCGATATCATATGCGGTTTCGCAAAAATAGAGATCGTAAT
ACTCCTTTGAGACCCGCTGAGATACAAAATATTATTGATGAAGTGAACGT
TCTGGTTGAATTAGAAGAAGTCATTAAGTACAAAAAAGCGAATGACCTTA
GGGAAGCTCTTGAACCTTGGAAACTTCGTGTTGATTTTGATGTGTCAAAG
ACTGAAATGTACTTGGAATTTCTCTATCATGCTCTCTTGGCTCTGGATGG
AGAGGAAGAACTCAAGAAAGAAACGATTGAAGCAGCCATGATGGAGGCCA
ATAGGCGTGATCACGAGCATTCCTATAAGGAGTCTGTAACTCGGCTTAAC
GAAGCTTTACGAGGGGACGACATATCGGCTACTTTGGATTATCTGAGACG
ACTCGATGTTCCCTTTCATTCCTTTGCTGGAAATTTATATCATGATGAGC
TAAGATATATATTAGTTGAAACGGGTAGGGATCTTAAAAGAGACTCTGTT
CTCTCTTTGGTTCAGTTTTTGAATAATGTTGCTTCTGTGAATCAAGCAGT
TCGCTTTAGAAACGTGGAAGAGACGTGGAGAACTCTTACTCTCAAAAATA
CAAATATTGAGGATCTGGATTCAGACTTGAAAGAAAATTATTTGGAAGCT
CTGAGTTGTGCATTAGAATCCAAGGATGGAATGTTGTTAACCCATTTTGA
GATTCAAGATGCTGTTGATGCTGTGAATAAAAGTACATCGGATGATATAA
TTGAAGCCCTTCAAAATATAAACAGTGCTTTGAAAAGAAAAGATCCATCT
CTTCTCTACAAAAGTCTGACCAATCCTGTATTAAAGTTGGAGACAATTGA
AGAAGACGATGCTACCCATACTCTAGATCTCCTTGAACAAATTGCCGTTA
ATAGATCCATACTTGAACATGAAGAGTCAGAGATTTGGGTTGACAACGTA
TTTGATGCTGTACATCAAACCATTCAGCATACTAAAGAAGCAACGGATGC
TGGATTTGCTCTTTCCATCGCTAACATGGCTATTCAACAAGGAGATCACG
CTCATACTTTTGAGACACTTAATCATCCAAGTTTATTTTTAACGGATTAT
CTTATTAAGGAACACTCAAAGACATATCAAGAAAGACTCTTACAGAGATT
CAATGAAAAAGAAGCGGAAGGAACCACACCTTGGGTTAAACATGCTCTGT
CTGATGGACATGGCTTTGTATATTTAAATCTCAAGGAACACATTTACTCT
TGGACTCAACCAGAAGAAGTACACTCTTCCTCAACATTTCTTGATTATCA
AGATATCCTTGACATACTTGAACATGTTAATCGGCTTGGGGGTGTTATAA
AAGACTATGATCAAGTGATAGTTGGACTTCAAGCTCGTATTCGTGGGTAC
ATTATCCGACAACGATTGCTTTCNTATGCTTCAACATTATTACGACAACG
TGGACTCAATAATTAAAGTGCAAGCTCATGTGAGAGGTCACCAAACTCGT
AAACGCTTCAAAGATGCTCTTGCACAATTACGTAGGAATCGCTCTCCAGT
ACTTAAACCCATTGCATCTTATTTGCCCTATGAAGAAGGTATAATCAAAA
TTCAAAGAGCTTGGCGTAAACACAAAAAGGCCATAGATCTACAAGCACTC
ATGAAGGTGGACACTCAAGGGAAAATCAACTTGAATGTCGTTCGAAAGTA
TTTATATCTTCTGGATCATAGTATGGAGGACTTTGATCAGGAATTAAATC
TCCAATCTCTGAAAGGTAATATAACAAAAGTAATACGCTTCAATCAAAAC
CTAGAAAAAAACCTTGATGTAATGGACATCAAAATTGGACTTCTTGTGAA
AAATAGGATATCTGTTGAGGAGGTTGTTGCGCATTCCAAAACCCTTAATC
ATCACAGCAACAACCATCATCGAGCATCTACCTTGAACTTACTACGGAAT
GATGACGACACCAATAATAACAACAGCAACAGCAATCATGGTTTAAAAGC
CCTCAAGAAGGAAAGTAGAACTAAACTTGATGCCTACCAAAACCTATTTT
ATTATCTTCAAACCAATCCTCAAACGCTTGCTAAGCTCATATTTGCAATG
CCTCAATTAAAGACTACCAAATTCATGGAGAGTGTTATACTGAGTTTGTA
TAACTTTGGAGCCAATCAACGTGAGGAGTATTTGCTACTTAAGCTTTTTC
AAACTGCTCTAGAGGAGGAAGTGCGATGCAAGGTGGATAAGCCAAGTGAT
ATTATTACAGGTCAACCAATGGTCATTAAAATGATTGTTAGTTTCTACAG
AAATGGTGGAAAGGGATCGAATTCTCTCCGAGAAATGCTTGGAACTATAA
TCCTTCGTGTTTTAGAAGATAAAAATCTAAGCATAAATACAAACCCAGTA
GAAATCTACAAGCAGTGGGTTAATTCTAAAGAATTTGAATCTGGTCAGGC
TTCTGGAATGCCTTACGATGTCACTCCCCAAGAGGCTTTATCACATGAAG
AAGTTCGTAAACGTTTAAATAGGTCTGTGATAAAATTGAAGCAAGTCACG
ACTATGTTTTTGGCTACAATCCTTAGTTCTCGTCATAAAATTCCTTATGG
AATGCTTTACATGGCTCSAGKCCTGTATGTTTCTCTCAAAAAAAAGTTTC
CCTCTATTCAGCAAAAGGAAATACTTAAAGTCGTTGGAAATCTTTTATAT
TATCGATTTATCAATGGGGCAATTGTTGCTCCTGATGCTTTTGATATCAT
TGGCGTGTCTGCTGATAATATCCTTAATAATGAGCAAAGAAGGAATCTTG
GCTCTATCTCAAAAATTCTTCAATTTGCTGCTTCCAAAAAAGGCTATGGT
GAAGAGAGCAGTCATTTGATGTGTTTAAATGGTTATATCATTGAATGCCA
TGAAAAATTTAAAAAGTTCTTCCTTCAATGCGTTGATGAGGTTGTTTCTC
CAGAAGAGGAATTCAATATGGATCAGTACTATGAGGCTMCCTTAATTGCM
AAGCCTGTGATTTTTATTTCCCTTCAAGAAATAGTGGATACACATCAATT
ACTGTTAGATTTTCAAGATACAGTTGCTCCAGATACATCAGATCCCCTTC
ATGAGCTCCTTGATGATCTTGGAGATGGTGGACCAAGTCTATGTTCCCTT
CTAGGGGTGGCAAGTGCTTCGACCAATGCTTCACTTGGAAATTTGGGAAC
CTCTGAAGTTTGTTTGACTTTAACTAACAAATTTGAGTTATCTGGTTTTG
ATCGATCGGATACTGAAGAACTTTTTATTAAAACTAAGCATCTTATTATG
TCAATCCTTCCTTGTACAAAGGAGGGCAACTTAATTGGATGTCTAAAGTC
TGAGACAACGCAGGAGTTTGAGACTCTTTACTGGCAGCTAGTGAATCAAA
AGGAAGAAGAAGAAAAGGAAGCAACTCGTAACAAATCCATGCTTGATCAC
ACGAACCCTTTTATCAATGATGAATGCCGATTACCTTTGGCCGACTGTAA
GCGACAAATTCTGAAAAATTTAATGGTGTTAGAAKTAGCCGGTCTCGTTA
CGTCCAAGGATGGTTGTAAATCTCTCATTAATTCTATCATTAAATCTATT
TTGAATCGTCGACAGTATCGACTTCGTCGTCAGAGAGAAATATTCCGTCT
GAATTTGACGCTCAAGTCCCTTAAGCTTAAGAAGAAGTTCCTTGAAGAGC
AAGTTGAATACTACGACACGTACCTCAAGCAATGCCTCAAAAACCTACAA
GTAAATAAAAGACGAAGAGTACATTTTCAGCAACCTCTCAAAAAGTCATC
TCCATCTAGTAATAGTCAAACTGTCTCTGAGTCTCATCATCATCATCGTT
GGGGTACTCGTATGAAGTCTCGCTCAACACTTCGATATTCCGCTAGTCGA
CTACATGAAAAGGGAGTCCTTTTAGCTATTGATGGACTGCCTCCAAGTCA
GTTCAAAAATGTTCAATTCGAAATAGTTCCTACAGAGAATGATGGAGTGT
TTGAGGTTCATGCAAAATTTATGGGAGTACGCCTTGAGCATGTGGATGTC
AACATTCAAGATTTGTTACAATTTCAGTATGAAGGTGTGTCTGTTATGAA
TATGTTTGGGAAAGCTAACATTAATGTCAATCTTCTATTACATTTCCTCA
ACTCCAAATTCTACGGAAGGAAAAAATAA back to top
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