EMLSAT00000004100, EMLSAT00000004100-699947 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004100
Unique Name	EMLSAT00000004100-699947
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s217	supercontig	LSalAtl2s217:479620..488141 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004100 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004100	EMLSAG00000004100-686866	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000017779	EMLSAE00000017779-726707	Lepeophtheirus salmonis	exon
EMLSAE00000017780	EMLSAE00000017780-726708	Lepeophtheirus salmonis	exon
EMLSAE00000017781	EMLSAE00000017781-726709	Lepeophtheirus salmonis	exon
EMLSAE00000017782	EMLSAE00000017782-726710	Lepeophtheirus salmonis	exon
EMLSAE00000017783	EMLSAE00000017783-726711	Lepeophtheirus salmonis	exon
EMLSAE00000017784	EMLSAE00000017784-726712	Lepeophtheirus salmonis	exon
EMLSAE00000017785	EMLSAE00000017785-726713	Lepeophtheirus salmonis	exon
EMLSAE00000017786	EMLSAE00000017786-726714	Lepeophtheirus salmonis	exon
EMLSAE00000017787	EMLSAE00000017787-726715	Lepeophtheirus salmonis	exon
EMLSAE00000017788	EMLSAE00000017788-726716	Lepeophtheirus salmonis	exon
EMLSAE00000017789	EMLSAE00000017789-726717	Lepeophtheirus salmonis	exon
EMLSAE00000017790	EMLSAE00000017790-726718	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778029	auto778029	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004100	EMLSAP00000004100	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s217:479620..488141-

protein sequence of EMLSAP00000004100

>EMLSAP00000004100 ID=EMLSAP00000004100|Name=EMLSAP00000004100|organism=Lepeophtheirus salmonis|type=polypeptide|length=676bp
MAEDLADXLDDIICSFDKVIPGNFEGVILTLGVWALAGAIVYCISVFVSN
SVKEENEKKLIQNKKQNGDMSQSPIVAKDEQRKKEKEEDLMKETELQPRE
RPKADQMVEQRGEVIEELIIPAKAYVCGSKKIDNPTNGIIPYSTTKADLF
VGEIEEDIILPSFAYKCGDDSIPPPLTSEIEDGDEPAADSLSENTPSISM
KCSGSDKKAVEWVNSCFERLCEAFTLDLLKQNWIENLNDYIKSLEDKVSV
IVTDIVRSTHENKCPIFTNIVSQTQQRDNITVTADINATLILKLSVSESH
SHPRKYYTFNITKLRGRLSISILNCDRIVIIKLDGWPEIQTELDGHDDSH
PFVSDIVVSALLWDIVEGEEQFLGLGIVAIDELLISPSQRHVIPLQGRPF
ASRNDTHNGLLTIQFILSELNKDVALNRSFEQAAVSLNQSSLLGVNEHKT
ILKITKRDGLNAPCEDSEGSEMSMGKRDESPLTRSRNRKKRKLVSTLKKR
ITGRSFSIGSFGDSRDTSSARAKQDALEQSRSISVDRAYSLSNVNVLDGK
SNLGKIQAISTGTFISEESSLVMEVDENNIKKYYLIPAEIAAKEKISMKG
TKLHIFMDHIFVAKHIKRGKMCEVCSSNIPFRLRKQGYICRDCQIVCHKP
CHIQVATHCLESSLPAMDILHIKKDL

mRNA from alignment at LSalAtl2s217:479620..488141-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004100-699947 ID=EMLSAT00000004100-699947|Name=EMLSAT00000004100|organism=Lepeophtheirus salmonis|type=mRNA|length=8522bp|location=Sequence derived from alignment at LSalAtl2s217:479620..488141- (Lepeophtheirus salmonis)
ATGGCCGAGGATTTAGCGGATANACTTGACGATATCATTTGTTCCTTTGA
TAAAGTGATTCCTGGAAACTTTGAAGGAGTTATCCTTACTTTAGGGGTTT
GGGCTCTAGCAGGTGCAATTGTCTACTGTATTTCCGTGTTTGTTTCCAAC
TCTGTTAAAGAGGAGAATGAGAAAAAATTGATTCAAAACAAAAAGCAAAA
TGGAGATATGTCACAAAGTCCAATCGTGGCTAAGGATGAGCAAAGGAAGA
AGGAGAAAGAGGAGGATTTGATGAAGGAGACTGAGCTTCAACCCAGGGAA
AGGCCGAAGGCAGATCAGATGGTAGAGCAGAGAGGGGAAGTAATTGAAGA
ATTGATTATCCCTGCTAAAGCCTATGTTTGTGGGAGTAAAAAAATAGATA
ATCCTACAAATGGCATTATACCCTATTCCACAACGAAGGCAGATCTTTTT
GTGGGAGAGATCGAAGAGGATATTATATTACCTTCCTTTGCATACAAATG
TGGAGATGATTCAATTCCACCACCTCTTACAAGTGAGATAGAGGATGGAG
ATGAACCGGCAGCAGATTCTCTTTCAGAGAATACTCCTTCAATATCGATG
AAATGCAGTGGTTCAGATAAAAAAGCAGTGGAATGGGTTAATTCCTGCTT
TGAAAGGCTTTGTGAGGCCTTTACTTTAGATTTATTAAAGCAAAATTGGA
TTGAGAATCTAAACGACTACATCAAGTCATTAGAAGTGGGTCTAAAGGCT
ATTATTGTTGTTCAAATGAATAAATAAATTTTGTATTTACTTCAGGATAA
AGTGTCTGTGATTGTAACGGATATCGTTAGATCAACTCATGAAAATAAAT
GTCCTATTTTCACAAACATTGTTTCCCAAACACAGCAGAGAGATAATATT
GTAAGTACTAGCTTTAAAAGTCAGATTGACGTCATAGACTTTTAATTAAT
GCCATATTTTAAAGTAAAAAATAACTCTCTATAACAAAAAACTAACTTAT
TAAAAGATATTGTTTCATCTCCTGTATCTTTAATATTAAATACATATATG
TATACTTTTACAAAGGTCTGACTACATAGATATGTATTTGATATTATTAA
TATGGAATCAAGGTCTGCACACATTAGCTCAAATTGATTCCAAAAGTTGT
ATGCTGTCAAATATAACATACAACATTTTTTATGCGCTTGTGATGAGGAC
TTAGCTCAGTCATTTTAAGTCAAAACAATATTTATCTCCTTAAATCCCAG
CATTTACTTCATTTAAGTGTGCCGTGTGCTACATAGTATATTTTAAGCGT
AGTCCTCTATTAGATAACTCTTTTTACATTCATTATTAGACCGTCACAGC
AGATATCAACGCAACTCTCATTCTAAAATTAAGTGTGAGCGAATCCCATT
CACACCCTAGGAAATATTATACATTCAACATCACGAAATTGCGAGGTCGA
TTGAGTATATCCATCCTTAATTGTGATAGAATTGTGATAATTAAATTAGA
CGGATGGCCAGAGGTAGTACTGAGAATCATTTTGAGATCAATAGCTAACC
ATTTGTTTAATTGTTGTTGTATTTTTAACTAAAAGATTCAAACAGAACTA
GATGGGCATGATGATTCCCATCCCTTTGTGAGTGACATTGTTGTCTCTGC
TCTTCGTGGAACGACAATGACTCTTGATANTGGATGACTTTTTGGAAGGY
ACGYTTTTCCCCGTCTTTTCGAGAGATAAAAATATTCAAACAGATGAAAA
CCCTCCCAATAGTCTTTTCCAATCTGGAAACACCTTTTTCATAAAGAACA
AATCGAAAGATGGAAGAAAGGGCATCAACTCCCGCGCACTCTCAGTTCTT
GTTGTAAAGGCTTCTGGTCTCTCAACTACCTGCCATCCCTTTGTTATACT
AGAGCTGGATGAACCATCACAAAAGTTCAAGACGGGTCTTAATCAAAGCC
TCATGTGGAATGAAGACTTTACATTGTAATTTTTTAGTCATTTGAGTTAC
TGATTCAGGGGCATCCGCAGGATTATATATATTATATTCTTTTTTGTTTG
GGGGGGGGGGGGGCGGGGAATTAGTTTTTTAATTTGAAAATTAAATTTTT
TGGTAAAAAATAAACCTTAAATATTAAATTTACAAACAAATATTCAAAAA
ATCCACAACCACACACAAAAAATTGAAAAATTAATTTGCAAATATTACAT
TTTCTGGAAGAAAAAAAATGGAAATATTATATTACATTAAATGTTTCACA
AAAAAAAAATTCCATATTAAGTTTTTTAGTAAAAATCAAGAATTCCTTAA
TCCTTAATCCCCTGCAGACGTCCCTGCCTTTGGGGCTATGTATTTTTCTA
ATTTATTTTTGTTCTAGACATTTGAGTCCGCTCAGTAAAGAGATTCTCTT
TGAAGTTTGGGATATTGTGGAGGGAGAAGAACAATTTTTGGGCCTTGGGA
TTGTTGCAATTGATGAACTACTCATTTCTCCAAGTCAAAGACATGTTATA
CCTCTTCAAGGAAGGCCTTTTGCATCGAGAAATGATACACACAATGGTTT
ACTCACAATTCAAGTAAGTCTCTCTGACTTTTTTTTTTTTTTTTGCTACT
TAGTAAATAAAATACTAGCACTTAAATATCCTTCCGAAAAATAGTTTAGT
AAATGTCAATTTTGCATTTTTAGAACGTTTTATGTGTTAACAATGAAAAA
CATGTTATTAACAGACTGTGAACGTATTTGATGCCAAAAGATGAAAAATA
AAATAAACACATTCAAACAAACAAAAACTGAAGGAAATATAATTGTATTT
TAATGGAAATAAGTAAATTTACTTTCTTAGTTTGAAATAATACTTTGATT
TTAAGAGGAATAGAGATTTTAAAGGGCTGAACATCTKCTCTRCCCCGCCT
TCCCCCCCACCATATTAAAGTTTAATTAAATGATTTATGAAATCTATATC
AAACATATTCTAGTTTAGAGTTATGCTGAAATTAATGGTGTGTCGGTCCT
TAATTAGGACTGAAAACTGCAGTCTCGTCCAGTTCAGTCATAATCGTTTA
GTACTGTATACCACTTATAAATTTGATACAGTTTGGTCCTTGATTATGTG
ACTCAGCTTTAATACTTTAAAAAACAGTTCCGGTACCGACGGTCTTAAGG
ACCCATAGGGGGGTCCTAGGACTGGACTGGACATGCCCGAATAAATAAGA
ACTGACACAACGCTGCCTGAAGCAGATATTATCCGTAGTCAAAATCGTGT
GTATAAAGGGCATGTTAAAAAAAAAAACACCAAAAATCAACATGTTAGCC
CAAACAATTTGAAGAATGTTCTTGAGGAGATCAGCTTCAATCAGCTGTAA
CAAGGGAGGAGGGGGAGAAGGAAATAAAGAAGGACAGGGGCAATAATTAT
CTGATGTCGATTCCCAATTCTACTCTGGAGTCCAACAAGGACTTACAGTT
ATGTATAAGTCCACCACAACAAATCCTTAAAGATTTACCCTCCATCTTTT
AAGAGCACACATGAATGTTTGATCAGGATTTGAATATAAATTTATCTATT
TATGAAAGGATGTTCATTACTCAGGAATTAGATAATAATGACAACTGCTA
AGGAAAAGAAAATTCATTACTGGGATTTTCTTTGTGGCAAAAATCGTTTC
TTTCATTTCAACGGTTTCGCTCTCGGTTCAGATTTATGGATCTTGGTTCC
GATTTTTGGTCGTATTCCTTTTTTATACAGGCTTAATTTCGTAACAGGGA
CATAAAACAAGTGGGTTCGGGCCCAGAAAATGATATTAGATACAAACAGG
GCCGTAGCTACCTTATACCCAGAGTATGTAGTGCCCATGTTCCAGTAGGG
TCCCCGAAAGCTAAATTTGCTTAATGCAATGGTTTTCAAAGCGAGGCCCG
TGAGTGGAGGATACGGTGATCGCTCTGCTCCGTTTTTTTCAAAAAAATAC
AGGATGTAATAGACCCCTGTACTGGTTTTGAGACTTAATCAGTAGAACAA
CTATTCAAAATTTGGTGAGGATTGTACTATATCTTATGTTGACATATTTG
GATTAATCAAATTGGATTATTTTCATTTTATTTCATAACATAAACATACA
TATATTGTTTAACAAATCTGAATAATTTCTATTTTCTTTAAATATTGAGA
CTTCACCTTTAGAACAAGTCTTCAAAAATTTGTTGAGGATTGGACTATAT
CTAATGTTGGCAAATTAGTAAATCTGAATAATTTATATTTTTTTAAATAT
AGGTTTTAATCACATAGAGTTAGATGCCATATTTTATAATCTGATTGATT
TTTTCACTGGTTTGGTATGCGACCACGGCAATTATCAACTACTTGTTATA
TGTTTTGAAAGTTTTTTCTCGTTTTTGATGTACCTACATAGTTATTGCAA
AGCTTTGCTTCCCTCTCTGCGCCATCATTTAGAACAGATATGTTTTCCAC
GATGGATTTTATATTAATATAACTATTGTTTGATTTCCATTTAGAAACAA
GTGTCTGTAAATATTCAGAATTGATATTTAATATTCGAAATTTATTCCAA
TTATCTGGCATAATGACTTTTGACTAATCAGTTGTATTTTCTTCAGATTT
TCAGTGTGAATTTTTGTTTTCCTAGTTCCATTTATATGGGGGCTTCTATT
TCGAGAATTTTGCTCGTAATCCTCACTTTTGCCGTTTCATCGACTGACAT
ACTAAACAATGCTAACAATGAACGTTATACATTTTTATATTCTAGGATAG
TATGAATTAGATTTAAATCATGTATAGGAGCAGAAGTTAAAGACTGGGTA
GTTATCCACCAAGAAATACAACAATATACAAAGAAATGTTTTTTCAATTT
TTTCGATTGTCCAGGGTAAGAAACAGTTCCTTGAGGCAATACATTTATTC
GAGCTGATAGTAGTATCATTTTAATTGAGTATAGCCTTTTCCCCATCCAT
CGAGTATTTTGAAGAGTTCCAAGTCTTTCATTTTTTTTTTTTTTGAATTT
CAGAGATACGTCACTAAAATAAACAAGTGTGAGCTGAATTAATTCTTTAA
AGCCCTTTCTAGAATAGTCAAACTTTAAAGCTTTCTTTCAAAGTGGAACT
ATCATTTTTTTTTTGTTAGTTTTTTTCATCTTATTCCAAGTTTCTTATTG
AAAGACTAACTGTGTTTTTTTTGTGGTTTAATATTTCAAAACTTTTTTTA
AATTTTCCAAATAAAGAAACTTCAGGAATTTTGGATACTTTAATTTTCAA
TGCATCACAAGAATTTATAAGCAATCTTTCTCCAATATGATATCTACAAG
CAACCCACAACAAATTTCTCTTCAAAAATTGTTGAATTGATATTGAATCT
GCATATAGTTTCCCACAGTTTGATGGTGTTGCGTCAAAAACTATATCCCT
AACATTTTTTGTATATTTCGAATCACTCAATAAATTAAAAGTAGTCTTTG
CAATTCTCTGGCTGAGTAAATCAATTGTTTTGTATTCTAATGCAGGAAAA
CCAAGTAGTTTTACTCCACCAATTCTCAAAAGAAGTATGGGTAATCTTTT
TTCAAAGCAATTCGGATTTTCAAGAGTTTCCATGAGTTTTCTATACCAGT
GCAATGGATGGAGGTTTCCAAGAACTTCTCACTTGTTTTGCAAAATTAGT
AACGGTTTCAATACCATATTTGTAGGATTGAGCATAACTAAAATTAGWCT
TCTTTAAGTAGGCGTTGATTGCTTTGATCACTGCAGACGTTTTTTCTGCC
AATGCTGTGACTCAAACATTATTCCTGACGGAATGATTTGACAAAGATAA
AACAACTGATGTTGGTGTTATACACAATTTCAATAAAATAAATGGGACGT
ACATTGGTTATCACAATTTCCATATCAGTGCTACCTCTCTAACACAAAAA
TGTATTTAATATGTACATCTTATTTTCTTAAGTTAGCAGTCTATGTTTCT
ACTTCTTTTCAGCGAATCAGTGTTCTCAACGTTGATTTGTTGAATTAGAA
TGAACTCTTGTTAATCGTTCAACAATTATTAAATAATAATTCCATTGTTT
AGAAGAATTGGCTATCTACCAACTAAAATTCAAATATTTTATTTTTTTGG
AAAAAAGTTTAAATATCCACAGCTATAGACAAAGAATTTCAAAAATCCAC
AGTTTTTTAAATTAAAATTTTTTGAAATAAAATTTCAATCATTCAATTTT
TTGGAGAAAAATTTAAAAATATATAGCAGTATATAGAAAATTTACTTTTT
TGGAATTTTTTGGAATCATATAAATTTCCGATATATTTTTTTCTTGAATT
TTCCAAAAAGAAAATTCCAAAATTAAATTTCAAATATGAAGTTTTTTGGA
AAAGAAAATTCCAAAATTAAATTTCAAATATTAATTTTTTTTTTTTTGGA
AAAAAATTTCAAATATTCTTTTTAAAAAAAAAATATAAAAATTTAAAATT
AAACTTCGAATATTAAAGTTTTTAAAAATCCACAATTATAAACAAAAATA
TTTGAAAAATTAAAACTAAAATATAAATTTTTTTGGGAATTTAGTTTTTT
AAAATCCACAATTATTAATAAAAAAATTTGAAAAATTAAATTTCAAATAT
TTAAGTTTTTCCGAAAATTTTTTAGAAATCCAAAATTATAAAGAAAAATA
TTTGAAAAATTAAATTTCAAATATTAAAGTTTTTCCGAAAATTTTTTAGA
AATCCAAAATTATAAAGAAAAATATTTGAAAAATTAAATTTCAAATATGA
TTTTTTTTGAGAAAAATTTAAAAAATCCATAGCTTTTCACAGAATATAAA
AATTTTTGGAAACAAAATTGAAAAATTCAATTAAACTTCAAATATTTAAA
TTTTTGTAAAAAATAAATCAAATATTAAATTTCCTAATAAAAAGAAAAAA
ACATTAATTTTTTTTTAGGGGCCCCCCCTAAATATATCCTAAATTATATC
CCCTGCGGATGCTTCTGCTTACGAATAAAAAAACATATGGTTGTTTTTTA
CATACGCAATGATGTGTTTTTGTCCTAATGTGTCATATGCGTGCCAGATA
GTCGACATTTCCAACAAGCTTATCCTTGTAGCCTACATACTTTTTTCAAT
AACGTTTTTTTGACATGTCTCTAAATTACAACACCTTATGTAAATATACC
ATTTAGAATTTAGTAAAAGTTTTTTATTTATTAATAAAGTGTTAAGCTCA
TTTATCTCATGACAATATATTTCGTATCCTTTCAGTTTATCCTCTCAGAA
TTGAATAAAGATGTTGCACTCAATCGGAGTTTCGAGCAAGCAGCAGTTTC
TTTAAATCAATCAAGTGAGTAACGTAACAAAATTATTTTTACATCAATCC
AATTAAAAAAAACAACGAGATATTTTATTATTTGATTGAATCCATAGGTT
TACTTGGAGTAAATGAACACAAAACCATCTTGAAAATTACAAAAAGGGTA
TGCAATAGGTGATAGATAAAATGTGTAAAATAACCTCTTCTTTATATTCA
TGTAGGATGGGTTGAATGCACCTTGTGAGGACTCAGAAGGCTCTGAAATG
TCTATGGGAAAGAGTAAGTATATAATACAGTCAACAATATGCTTATCTGT
AATGAATAAGCCAAATTATAGTGATTATGCAGCTAAAAATTCATTCTTAG
AATGTATTTATTAATATTAAATGAGAGAGGGATATTTTCTTTTATGTTAA
ACGTAGATGCTGAATTGTATCAGGTTGGGATTATTTGATTATTTAGTTTC
CGTCATTAAGGAGATGAATCCCCACTTACTCGAAGTCGGAATCGAAAGAA
AAGGAAATTGGTGAGCACGCTCAAAAAACGCATCACTGGAAGATCCTTCT
CTATCGGCAGTTTTGGAGATTCTCGTGATACAAGCTCAGCTCGAGCTAAG
CAAGATGCTTTAGAACAATCCAGATCCATTTCCGTAGATCGAGCTTATTC
CCTCTCAAACGTGAATGTATTGGATGGTAAGGGGGATTCAAAAAATCATG
TTTGACCAATTAAATATCATTATCAATTAGGAAAGTCAAACTTAGGAAAA
ATACAGGCCATATCCACAGGCACATTTATATCAGAAGAATCCTCCTTGGT
AATGGAAGTTGATGAAAATAACATTAAAAAGTGAGTAGCCTTGAATATCA
GATTTCTCATTTGATGATTGATTTCTCCAGGTATTATCTCATTCCTGCGG
AAATTGCTGCCAAGGAAAAGATATCAATGAAAGGAACAAAGTTACACATA
TTCATGGACCACATTTTTGTGGCGAAGCATATCAAACGTGGAAAGATGTG
TGAAGTTTGCTCAAGTAATATTCCTTTTCGTCTGAGGAAGCAGGGCTACA
TCTGTCGTGATTGCCAAATTGTGTGTCATAAACCCTGTCATATACAGGTT
GCAACCCATTGCTTAGAATCATCTCTACCTGCAATGGATATGTAATTTCA
CCTTTTTTAAATCAAAATAATCTAAGTTAGCATTTATTTAATTTCAGATT
GCATATCAAAAAGGATCTCTAA

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