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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s227 | supercontig | LSalAtl2s227:69191..76584 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004333 >EMLSAP00000004333 ID=EMLSAP00000004333|Name=EMLSAP00000004333|organism=Lepeophtheirus salmonis|type=polypeptide|length=1237bp
MLPGTNYFKSIDCPFFASGLCERPYCHFLHRRISFNSEPEPALPFVSQPA
PHVDAKGHRFYPQPHDAPVYKPTPKALLATENKPKPYIPSSLAKVAALQK
PPSLPRPTLKPREVLGDIGDLSSSDEESKNPDLIGAILLQGVKSGVLGGE
VSEFQHELIKNTYKIKKSKPLKEELEGSIKKEKDAEVVIVISDDEDAIKE
AQRKKAVEEEDRKKRILEDERLEAKRLLEEKEKELEELEKKRQILENFYG
KNDSKKRDPSLENESRYDRKKNKHKSRKRKRSKKKYSRKKSKRRRTSSTS
SSSSSSFSDSSSQSSSSFSSSEESDLEREYRRLHRKRSKHKKSKKHYRDK
KISRKREELVKLKPDHKNLEMTIKKEGLDDTNKLNKISSSVIKKEKGLDP
SIIIKNEAVEEVNKPLLEPPNKEIIPSPSQIKDEDLPESVKSFLDAMEEI
DQKIVKDEKSKRSPTCSSEHKNHKSSRSHGSRKHSHSSSTHKSSNSGKSS
KKSSHHDRRSSKSDEKSSHHDRRSSKSDEKSSHYDRRSSKSDEKSSHYDR
RSSKSDEKSSHYDRRSSKSDEKKQSKSSSAPSSSSSRSSKSKSTPHEIKT
SAVLQESIEEPTPGPSSKSDFSRIEENSSDRDEPRQDYFENSGSEDVFEN
EDDELKRIFEEHEEQVRKSASSSSNKKIKSAKDTAHSQNKNVETLNPKSK
KRVAHKAETDSSLSRPPIVRKPISATQQMLERYKKIQNMRENSEIENRLA
SLVGEDEPPKSKMKSSTAQSKSVNKSRTAVTTTKGTARXSHVPTVNISKP
LIAPDMKSKIPSSIRQRYLDSIVEECCKIYNGDKGNAYARAAREEQVCCG
RSKNRNIYLNVVVNCIKKLRTEASQAPKSKQTLVIPQGSMVTSHLQILAG
KGGSKGSWSIEKPKSTIDENSPGLTYAILKRYVLSKEDMIENGYPVMNSE
IKGKAYITQNPQYSNRKPQPQEPDKRRCDRCSTIYKVDLQGKQTETGECI
YHWGRLYRQRSNRALGPTSGYYCCNGDTNSEGCEVSQVHITDMEDYNNMR
GFVTAFSASEEMNDGNYGIYALDCEMCYTTFCNELTRVTVINYEGKTVYE
TMVKPSRDVIDYNTRFSGITQKDLENVTTTIIDVQAVLLSMFSSDTILIG
HSLESDLKALKMVHSMVVDTSIVFPHKMGPPYKRALKHLAAEHLKRIIQN
DVGGHDSAEDALAALDLMKVKVKSDVKKLQQDSLKQR back to topmRNA from alignment at LSalAtl2s227:69191..76584+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004333-700180 ID=EMLSAT00000004333-700180|Name=EMLSAT00000004333|organism=Lepeophtheirus salmonis|type=mRNA|length=7394bp|location=Sequence derived from alignment at LSalAtl2s227:69191..76584+ (Lepeophtheirus salmonis)
TCCTGATTAGTGAAAAGCAGCGTTCTAGAGCGAGGTACAAAGTAAAGTAC
ATACTTGAGAAGTTGAATACCCCAAGAGGCGTAGCTCATGATTTCCGAAG
TTCATCAAGACATTGTGTTTTTTGTAGATTGAAGCTTATCCTCTTCCCTG
ACGACATGAGGATGTCGTATCTCAGGCCTCCCTTGGCGTGATCCTATTGC
CTGAATTGCCTCTAAAGCCGCCATCCGTCCAGCTATGCTACCCGGCACAA
ACTACTTCAAGTCCATTGACTGTCCCTTCTTTGCCAGCGGTCTTTGTGAA
CGCCCTTATTGCCACTTTCTACATAGAAGAATCTCCTTCAATTCCGAACC
TGAGCCGGCTCTTCCTTTTGTCTCGCAGCCAGCTCCGCATGTGGATGCGA
AGGGACATCGTTTCTATCCCCAACCTCATGATGCACCCGTCTACAAACCC
ACTCCAAAGGCTCTTCTTGCAACAGAAAATAAACCTAAACCTTATATTCC
ATCCAGTTTGGCCAAAGTCGCTGCTCTTCAGAAACCTCCGTCTTTACCAA
GACCCACTCTCAAGGTTCTAAATCAATATTATGGACTTTCCATTCAGCAG
ATTCCTTCCAGAATTTCTTCTTGTTTTTACCCATGTTTTTTTTAAAATCA
AATTATAAATTCTAATGACTAATTACAAGTTCAAAAGTACATCAGAATTC
ATTCCATCTTTTTACCTCATTTGTAAACATGCATTAGCAATCTTTTGATC
AATTCACGCTTAAAACATAGACTCATCTCTATTTATTCAACGTATTATCA
CATACTAATGATTCCCTTGCTTTATAATAATACCTACTTGATATCACATC
AAGAGTAAGTTCTAAAAAAAACTTACTCTTGATCTGTACTTAAAAACAGA
GACAACATGTTTTTCCATACCAATGTATGGATCTTTATTAGTGTCTTGAA
AATGTTAAGTAATGAAGTTAAAAAAAACCAAAGAAATATTAACTATCCTT
TATATAAATAAGTATTGTTTGACATTTTTGTTTAATGTACTTTATTTTTA
GCCTAGAGAAGTCTTGGGAGATATTGGAGATTTGAGTAGTAGTGATGAAG
AAAGCAAAAATCCAGATTTGATAGGCGCTATACTATTGCAAGGTGTTAAA
TCCGGTGTCTTGGGCGGTGAAGTATCGGAATTCCAACATGAACTTATCAA
AAATACTTATAAAATCAAGAAGTAATGCCATTTGTATTCATGAGACTTAA
AATTATGACCTTTTCTTTTTGCAGATCTAAACCCTTGAAGGAAGAACTTG
AAGGATCGATAAAGAAAGAAAAAGATGCAGAAGTGGTTATTGTAATCTCT
GACGATGAAGACGCTATTAAAGAAGCTCAGCGAAAGAAAGCGGTAGAAGA
AGAGGATCGAAAGAAAAGGATTCTTGAAGATGAAAGATTGGAAGCCAAAA
GGCTCCTTGAGGAAAAAGAAAAAGAACTCGAGGAGTTAGAAAAGAAGAGA
CAAATTTTGGAAAATTTTTATGGAAAAAATGATTCGAAAAAGAGAGATCC
TTCATTAGAAAACGAATCTCGATACGATAGAAAAAAAAATAAACATAAAA
GTCGTAAAAGGAAACGTAGTAAGAAGAAATATTCTCGGAAAAAGTCAAAG
AGGAGACGTACTTCTTCAACGTCTTCCTCTTCATCCTCCTCATTTTCGGA
TTCGTCCTCACAATCTTCGTCGTCATTCTCCAGTTCAGAAGAGAGTGATT
TGGAAAGAGAGTATAGAAGACTTCATAGGAAGCGAAGCAAGCATAAAAAG
TCAAAAAAACATTACAGAGATAAAAAAATATCTCGCAAACGAGAGGAATT
GGTTAAATTAAAGCCAGACCATAAAAATCTAGAAATGACAATTAAGAAAG
AAGGATTAGATGATACAAACAAACTTAATAAAATTTCGTCCTCGGTAATC
AAGAAAGAAAAAGGTTTAGACCCTAGTATCATAATAAAAAATGAAGCAGT
TGAAGAAGTTAATAAACCTTTACTAGAGCCTCCTAATAAAGAGATAATTC
CATCTCCCTCTCAAATTAAGGATGAAGATCTTCCTGAGTCTGTCAAATCT
TTCTTAGATGCAATGGAAGAAATTGACCAAAAGATAGTAAAAGATGAAAA
GTCTAAGCGTTCACCGACTTGTAGCTCTGAGCACAAAAACCATAAGTCAT
CTAGAAGTCATGGTTCTCGGAAACACTCGCACTCCTCCTCGACTCATAAA
AGTAGTAATAGCGGTAAGTCATCTAAAAAATCTTCTCATCATGATCGTCG
AAGTTCCAAGTCAGATGAAAAATCTTCTCATCATGATCGTCGAAGTTCCA
AGTCAGATGAAAAATCTTCTCATTATGATCGTCGAAGTTCCAAGTCAGAT
GAAAAATCTTCTCATTATGATCGTCGAAGTTCCAAGTCAGATGAAAAATC
TTCTCATTATGATCGTCGAAGTTCCAAGTCAGATGAAAAGAAACAATCAA
AATCCTCTTCTGCACCATCTTCCAGTTCCTCAAGATCTTCAAAGAGTAAG
TCAACACCACATGAAATAAAAACATCCGCAGTTTTGCAAGAAAGTATTGA
AGAGCCTACTCCTGGACCAAGTTCAAAGTCTGATTTTTCTAGAATTGAAG
AAAATAGTTCTGATAGGGATGAGCCTAGACAAGATTATTTTGAAAATTCT
GGTTCAGAGGATGTTTTTGAAAATGAAGATGATGAATTGAAGAGGATTTT
CGAAGAGCATGAAGAGCAAGTAAGGAAATCTGCATCCTCATCCTCAAATA
AAAAAATTAAAAGCGCAAAGGATACTGCCCATTCTCAGAATAAAAATGTT
GAAACTCTAAATCCTAAGAGTAAGAAACGAGTTGCACATAAGGCAGAGAC
TGATAGTTCCCTCTCTAGACCTCCAATAGTCAGGAAACCCATTTCTGCCA
CACAACAAATGCTTGAGCGCTACAAAAAGATACAAAATATGAGAGAAAAC
TCTGAAATTGAAAATCGTTTGGCATCCTTGGTGGGAGAGGATGAGCCTCC
AAAATCTAAAATGAAATCTTCTACTGCCCAAAGTAAATCAGTTAATAAAA
GCCGAACGGCTGTGACTACTACAAAAGGTACGGCACGGGMATCTCACGTA
CCTACGGTGAACATTAGTAAACCTTTAATTGCTCCTGATATGAAATCAAA
AATTCCTTCTAGTATACGTCAGCGTTATCTTGATAGTATTGTTGAGGAGT
GCTGTAAAATTTATAATGGAGACAAAGGGAATGCATATGCTCGTGCCGCT
AGAGAAGAGCAAGTTTGTTGTGGTAGGAGTAAAAATAGAAACATTTATTT
AAATGTAGTTGTGAATTGTATTAAAAAGCTACGAACTGAGGCATCTCAAG
CCCCAAAATCTAAGCAAACTTTAGTAATACCCCAGGGATCCATGGTTACA
TCCCATTTGCAGATTTTGGCTGGAAAGGGAGGMTCAAAAGGTTCTTGGAG
CATTGAAAAACCCAAGTCTACTATTGATGAAAATAGCCCTGGCTTAACTT
ATGCAATTCTCAAGCGTTATGTTCTATCCAAGGAAGACATGATAGAGAAT
GGATATCCGGTTATGAATTCTGAAATCAAAGGGAAAGCTTATATAACCCA
AAATCCACAGTACTCAAATCGAAAGCCTCAGCCTCAAGAACCGGATAAAC
GTAGATGTGATAGGTGCTCCACTATTTACAAAGTTGACCTTCAAGGTAAG
CAAACTGAAACTGGTGAATGTATTTACCATTGGGGTAGACTCTATAGACA
AAGATCTAATAGAGCTCTGGGACCCACATCGGGTTACTATTGTTGTAATG
GGGATACCAATTCTGAAGGTTGTGAAGTCAGTCAAGTTCACATAACAGAT
ATGGAGGATTATAACAACATGCGGGGTTTTGTGACTGCATTTTCTGCATC
AGAAGAAATGAATGATGGCAACTATGGAATCTACGCATTGGACTGTGAAA
TGTGTTACACGACCTTTTGCAATGAGCTAACGAGGGTCACAGTGATAAAC
TATGAGGGTAAAACAGTGTATGAAACTATGGTGAAACCCTCCCGGGATGT
GATTGATTATAATACGCGATTTAGTGGAATTACCCAAAAGGATTTAGAAA
ATGTTACGACCACGATTATAGACGTTCAAGCTGTATTATTATCCATGTTT
TCATCTGATACAATACTCATTGGTCATAGTCTTGAAAGTGATTTAAAAGC
ATTAAAAGTGAGTTTGATTTGTTCCCCCTTTTAGTATTTTGTACAATTAT
TGAACGGATTTTACAAGTTGTTTTACCAACGTTTCATTATGCTTTATTTA
ATTTCTAGCCTTTCATTGGTTCCATCATTTCATAAAATTATGTAATTTCT
ATATTTACGAGTCATATAACTGTGGGCATTTGCACTTAGAATTGAGCCGC
AAAAGGCTTATTAACTAGTCTTTTTTTTTTTTAAAGTCAAGAAACACATA
ATTAAGTACTCTAAATTTATCTAATTTTTGGTTACAACTCAAATGAGCGT
ACAAGTTACGATTTTGTAACTTGTATCAACAGATTGTAATGTCTTATTTA
ATTATAACACCAAGTATAATAGATGCTATCATTTCATTTTGATTTATTAA
TATTACCTATCTATTATGTATTTAGAAGTAATATAACTGTGGGCATTTGA
TCGTTAATATGTGCCACTTATTATATATTTATCAATGAGTAATTTCATTT
AAAAAGTAAAAAAAAAAAACAACTATCAATAATGATACTCCATGAGTATT
TGTAATGTTTCATCTCATTTGGTTGGTTGCAAGTTCTACAAGACATGCAT
TTGCAGCGTTTTTTATGTATCCGTATATGTATATTATTAATATATTGATA
TTTATTTTCATGTTTAATTATAGATGGTTCATTCGATGGTCGTCGATACT
AGTATTGTTTTTCCACACAAAATGGGCCCTCCTTATAAAAGGGCCTTGAA
ACATCTTGCAGCAGAACATCTTAAACGAATTATTCAGAATGACGGTAAGG
ATTATTATTATATTAAGTATAAATATCTGTTAATTTACGTTGAGTTTTTT
TAATATTTTTTTTTCCTCTCTAAACATTTGAAGTTTGTGTATTTCTTTTT
CGCGTGCAGTCTTAACCAAGTATTGCGCGTAGAGTACAAACATCATACCC
AAAATACGTTTTCCTTTTCAACCCTTTTTATTTATTATTATTTTTTTAGT
TGGGGGTCATGACTCTGCCGAAGACGCATTGGCAGCCTTGGATTTAATGA
AAGTCAAAGTCAAATCAGATGTGAAAAAATTACAACAGGACTCCTTAAAG
CAACGATGATACCTATCTACTTCATAGTAATTATATATATAAATATATAT
TTGTAAATTAAGATAAATATTTTATAGGTTTAAAATTATGAGTTGAAAAA
CAACTAAATATCCGTTTCTACATACTTAATTATTTAAAAGTTTGCTTATA
AAAGAGAGAGATGTTATTAGTATTTATGTATATATGATAGTATCAGCAGT
AGTATACCTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
TGTGTATATTTATATATATTGTGGAAGGGCGAAACGCACGCACGCCCAAC
CATGGCTATTTTCGGAGAATAGTAAAATTGAATACAATTTGTTCCACTTA
TTTTTGGTCCTTAGGATTTAGTTATAATTTCATTCTCAACATGAATTATC
CTTTGAGGGTAATTTCCTTATTTCTCCTCTCCTGCCTCGTACATTCCAAA
GATGTGCCCTCACTTCAGGTTGATGTGACTAGAGAAATGAATTGTGCGGA
AACTCGGAAAGCTGGTGAAGGAGATAAAGTGACTGTTCACTATGGTGGAT
TTCTGAGGGATGGGACAAAATTTGATTCCTCATTTGATAGATCAAAACCC
TTTACATTCCCCTTAGGAAAGGGTAAAGTGATCCCTGGATGGGATAGTGG
TCTTATTGGGGTATGCCCTGGTGAAGAAAGACATTTAGTTGTGCCTTCAC
ATTTAGCATATGGAGATCGTGGAGCTGGAGATGTGATCCCACCCGGTGCT
ACATTGCTATTTGACATTGTTGTAGTCAAAATTGAGCAGGTACCTACGCA
GAAAGAGATACAAGAGGAGCAAAATCGTATCCAGCAACAACAAGAGGAAG
AGGAGGAGAAAAGACGTGCCGAAGAAGCTCAAAAGTTGAAAGAGCAACAA
CAAGTGGCAGACTATGATTACTATGAGGATTCCTCTGATCCTTGTGGCGG
CGGMCAATTACAACAGGAAGTTATATATATTCCTAGAAACTGCCAAAAAA
AGTCCCGATCCGGTGACAAACTCTCCATGCATTATACTGGAAAACTCTAC
GATACAGGAGTTAAATTTGATTCTTCAAGAGACAGAAATAAGGCATTTGA
TTTTACTCTCGGAATAGGACAAGTGATTGCGGGATGGGATGAAGGGGTAA
AGGATATGTGTGTAGGTGAGAAAAGGACTTTGGTTGTTCCTCCTGGAATG
GCTTATGGAGAGAGAGGMGTTGGTAACGTCATACCAGAGTGTGCTACGCT
TATTTTCGAAGTGGAATTAGTCGACATTAAGAACTAATGATCAATCATTT
GTCAGTAAATCATTTACATTGCTCAGTTTTGTTAGTAATATTTGTATACA
GTATACTACTTCCTCTATAGGTTGCTGTGTATGCGTGTATCTTTGACATT
TTACGTATACAAAAAATAAATTTATCCCATTTGTTATAACTACTATTTCT
GTTTGTTAAAATAATTATAATCATCCATAATATTTAAGCACATAGTTGTC
ATTATTTGTAATATTATCTCCTGTGTGTACTCTATCTCATCAGTTGATCA
CTTTCTTCGTGGCAATTATTAGAAATTTACTTTTTTATTTATTGTATATA
TACATATTAGTGGCGGTTCATTTTCTTTAAAAGAAAGTCGTAAATTGATT
TCTACCATGTAATATGTATGTACTACATAATATTTCATTTCACACTGTGG
TTTTTGTAGTAGAAGAATAAAATGAGGCATTTCATGGATTGTTTTCTGAA
ACTAAGCACATTCCCGTACATAAAAGTATGGGTTTAGTGAGTTTGAATTG
TATCTGGGAAAAGGAGGGAAGTCTGGAGAGTGTATGCGGTTTCAATCATT
CTTATTCTTTTAAAGTTGTAGTATGAATATATATGATATTATTAATTATG
TTCCTACAACTTAGAGGGGAATGATTGAACGAACAAACTACAAAATATAC
ATAAATAGTGAATATTCATCCTTTCATTATATAAATGGTTATGTGGTTCT
CTCGAGTTGCAAATCCCTGCATTGTTGGTATTCTAGGAATGAAA back to top
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