EMLSAT00000004524, EMLSAT00000004524-700371 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004524
Unique NameEMLSAT00000004524-700371
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s236supercontigLSalAtl2s236:410090..410964 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004524 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004524EMLSAG00000004524-687290Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019689EMLSAE00000019689-728617Lepeophtheirus salmonisexon
EMLSAE00000019690EMLSAE00000019690-728618Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777382auto777382Lepeophtheirus salmonispolypeptide
EMLSAP00000004524EMLSAP00000004524Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004524

>EMLSAP00000004524 ID=EMLSAP00000004524|Name=EMLSAP00000004524|organism=Lepeophtheirus salmonis|type=polypeptide|length=266bp
MTSSQVISDSTTTKKPIEDTTLDEEARPSLTSSTETISTTIINFISSTVK
PLIKLGSNTEVPQKSTTEVPQLDISTTASVEENVFTVLPTGIISSNDSVI
ESSTEFASNEDKEHVFTVLPVDISSLTTESSDQFVDDGVKGSDKESTKEL
TSTTPSPVIDDASEDKKPSPIGGVSLTSNSVNSESTTSFSKQDYKTTKSP
VFEDVSDAKISTSTVETRKEEEFSSTPAPSTITEKDTESEVVSEGSSNAF
NDVSPGTLDDAQDSSK
back to top

mRNA from alignment at LSalAtl2s236:410090..410964-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004524-700371 ID=EMLSAT00000004524-700371|Name=EMLSAT00000004524|organism=Lepeophtheirus salmonis|type=mRNA|length=875bp|location=Sequence derived from alignment at LSalAtl2s236:410090..410964- (Lepeophtheirus salmonis)
ATGACTTCATCTCAAGTTATATCTGATTCAACTACTACTAAAAAGCCAAT
CGAAGATACAACTCTAGATGAAGAGGCGAGGCCAAGTCTGACAAGTTCAA
CTGAAACAATTTCAACTACCATCATTAACTTTATTTCCTCAACTGTTAAA
CCTCTTATCAAATTAGGATCAAATACGGAAGTACCTCAAAAGAGTACAAC
TGAAGTTCCTCAATTAGATATTTCTACAACTGCTTCAGTTGAAGAAAATG
TTTTTACAGTGTTGCCTACGGGTATTATATCATCAAATGATTCTGTGATA
GAATCTTCTACAGAGTTTGCATCCAACGAAGATAAGGAACATGTGTTCAC
TGTATTGCCCGTTGATATAAGTTCTCTAACGACAGAGTCGAGTGATCAGT
TCGTAGATGACGGTGTTAAAGGATCAGATAAGGAATCAACCAAAGAGTTA
ACTTCCACCACGCCTTCGCCTGTAATTGATGATGCTTCTGAAGATAAGAA
ACCATCCCCAATTGGTGGAGTTTCTTTGACTTCAAATTCTGTGAACTCGG
AAAGCACGACTTCTTTCTCAAAACAGGACTATAAAACAACCAAATCGCCA
GTATTCGAAGATGTTTCAGATGCAAAAATCTCGACATCTACAGTTGAAAC
AAGAAAGGAAGAAGAGTTTTCATCCACCCCAGCGCCTTCAACAATTACAG
AAAAAGACACTGAAAGTGAGGTGGTCTCAGAAGGGTCGTCAAATGCTTTC
AATGACGTTTCACCAGGAACTCTAGATGATGCTCAAGGTACTACGACTGA
ACGACCAGAGAGTGAAAAAGTATTTACTGTTTTACCCACAGACATTTCTT
CTATTGATAAGATAGCTCAAAGTGA
back to top
Add to Basket