EMLSAT00000004595, EMLSAT00000004595-700442 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004595
Unique Name	EMLSAT00000004595-700442
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s23	supercontig	LSalAtl2s23:342032..345535 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004595 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004595	EMLSAG00000004595-687361	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000020004	EMLSAE00000020004-728932	Lepeophtheirus salmonis	exon
EMLSAE00000020005	EMLSAE00000020005-728933	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776595	auto776595	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004595	EMLSAP00000004595	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s23:342032..345535-

protein sequence of EMLSAP00000004595

>EMLSAP00000004595 ID=EMLSAP00000004595|Name=EMLSAP00000004595|organism=Lepeophtheirus salmonis|type=polypeptide|length=158bp
MRLFFCYMDPIPSPGRFKLILIMNRDEYFDRSTIPAEWEDGILCGRDKCC
EIHGGGTWCVMNEEGRIGILTNLFQWTRDPEIEELKYSNDFLMRNDKIIA
SPFITNSMYKGRSYGTRSQTIILIDYYDEVGYYESTRDFNPQTEEEHYTK
VIKEFKLL

mRNA from alignment at LSalAtl2s23:342032..345535-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004595-700442 ID=EMLSAT00000004595-700442|Name=EMLSAT00000004595|organism=Lepeophtheirus salmonis|type=mRNA|length=3504bp|location=Sequence derived from alignment at LSalAtl2s23:342032..345535- (Lepeophtheirus salmonis)
ATGCGTTTATTCTTTTGCTACATGGATCCCATTCCTTCTCCCGGAAGATT
TAAATTAATACTCATCATGAATCGAGATGAATACTTTGATCGATCTACTA
TTCCCGCAGAATGGGAGGATGGGATCCTTTGTGGCCGAGATAAATGCTGT
GAAATCCATGGAGGAGGAACTTGGTGCGTCATGAATGAGGAAGGACGGAT
TGGAATTTTGACGAATCTTTTTCAATGGACAAGGGGTTAAACATCTCACG
GATCGAGGGAGTCTAGTTACAGACTATTTGAAGGTAACAACAGAACCCAT
TTGTTTACTTTTCTCCTACATTTAATTTTCATTTCCAGGGGTATAAATCA
CCCATGGACTATATGAAAGATCTTACATGCAGAAGGACTCTCTACAAACC
GTAAAATCTGATCATCTTGGAGAAAAATGACAAAACCAGTTCCTACGGTT
AGTTTTATTACGCACAAGGATTCAACGGTAAAAATATAATTGTTATTATT
ATTCTTTATCGGAGGKGGGGACATAGACTCGMGACTTGCAACTCTACTCM
GGKTCATATTTTGAAGACTTGCGATTCAAAAGTTATTTCTATATTGTCAA
CAGACATTAAGTAATCTTTAAAATATATTTTATTTTCTGTGGATTTGGGC
TTAAAAATAGGACGGATTCATATTTTCTCGGATCCGGGTCGGTTTGGATC
TTTAGACATAAATACTTGAGTAAATTTCGGGTATCCAAACTTTTGGATTA
GATCCGTAATCAAATTTAGACAGATACTTGTTTTTAATCTAAAGAGTATT
TTACTCGAAGTTTAGACCTAAACAAAACAGGATTCAAATTAATTTACATT
TTCGCCGATTAATGATGCCGAAACATTGAATGACCCGATGTTATTACTAA
TAGAGATAAATATAGTTATTATTATAATAATATTGGACACGTCGTTACTT
TAATTTTACCTCGCAACTTTTCATCCAAAAAGATACAGAAAAAGACCCAA
AATTAGTTGGTAGTTGGCCAATTCCTCCACTTATGGAATTATTATTGAAT
AATAGTTGATATTTGCTCACAGCATAATAGGAACACATTCGTATCCAACT
AATCAATCTTAAGAATACTGATTACAAGAAATAAGAATAAACTTCGATCA
CTGGCAACAAAATAAAGTGTAGTTTGTTGTTTTTGTGAGCACGTTGTTAC
CTTGATAGCAAAAAAATATCCATTGTATTTTCTTGTCAACTCTCGTTGTT
TTTGCATCTTTTTTCCTAATCAGTGGTCTGAACGCTTTTTGGGCAATTGG
CCTAAAACATTTCTGTCGAAGGACAATTTGGCAAACGTACATTTCCCCGA
ATGAATTTTTTGGGAAAATTGGCCAAAAATTGAAACTATTGATATATACA
ATTGCATACTTTAATTCATTTAAGATGACAGGAAAATATTTTAAAATTAA
TTATATTCATTAATGATCATTTTATACACACAACAGAGTAGTATGTGGTT
CGAATGTTTCGAATGTATTTCGAATCTAGCGCCGAGGCATTTCTAATTAA
CAAATATCCCGACCCACGGTTTGGGTAGATGAACTGCTGCGCCCCGAGGC
AGGTTAAATTCTTCTGCAGCTACTTCCCTGAGCATCAAAGAACCGTCCTA
ATATCCCAAAATACACCCCGTCCATCAGGCTGTACATGTGAAGTGCTGGG
ACGGTTAAAACTTTACTGTTTCAACATTTCTAAGCAAAAAGGACCTTTTC
TAATATGCTAGAATACACCCAACGCTATGGTTATGTATATGACCGGCTAM
TTCCCAAGGKAGGGKAAATTATTYCGCCACCAATTCCCTGAGCATCAAGG
AACCCCAGCCATTAGGTTGTATAGGAGAATATTTTCTACAATATAAGACT
CAATAATTTACCTATATTTCATATAGCATATGACCAACACTTATTTATCA
TAGTATCATTTTAAATTGAATTAAAATATGCAATCGTATATTTTAATACA
TTTAGTATCATTTTTGGGCCAGATGTCCAAAATCTTCTAGGCGAAATGTC
CTTTGGCAAGAATATTTTCTGCCTCTAGTCCGCTCACGGTTCTGAACTTT
GATTGATTTAAATATAATTAGATCTTTTTAAACTGCGAACAATTGTTTCA
TAGTTGCAAAGAATTAGCTAATTATCAACTGATTTTCTGCCTTTTTCTGT
TTCTTTTCTTAAGTAAGGTAGTATGACACAATAAAAATAGCAACGCGTGA
GTTAATGCCGTGTGTAATAATCACGCTATGTAACTATTTATGTAGATGTG
CAGTGATTAAAATCTGATGTCTTTAATAGCTGGCCCCTATTTTTGGAATT
GGTAATCGGAAGAATGAATTGTCATTATTATTTAATTCCTGAGTAGTGAA
TATCCTTTCCTAAATATATATTTCATTATATCCAAAACCTATTGAACATT
CGTGTGTGCTCATAAAAGACGGAGCGTAACCCTGAGGATTTGTTGCGGAG
TTATAATTGTAAGTCCATGGACTCAGAGTAGAATTGGGGATCGACAACGG
AATAATTAAAGAGAATTTCTTTGTTTGTATCCTATTCTCCTCATCCCTTG
TAACGGCTGACTGTAGCTGATCTAATGAAACGTCATGATCATTATTCTTT
CTCTTCTCCAAAACATTCTTCAAATTGTCAGGGTTACCATGTTGATTTTC
GGTTTCTTTTTTAACATGGCCATTTTACACTTGATTTTTAGCATTAAAAA
TGTAGATTCATAGACTAACCAAGATAAAAAGGGATTCTAAATTCAATATT
AATAACATTTTCTTTATATATATAACTAGGATGAAGTATTAAGGAACAGA
ATAAGCTTTTTAATATCCGAAAAATCCCTTGGATCCTTTTTATGATCCGA
AAAAGTACAAGACCCGTCCTATCTCTACTTAGGCGTATGACCAAAGACTT
GAGACTCGATTCGGACTGGCGGKAGAAGGACTTTTCCCCACCTCTGTAAT
TTAAATTATATAATATTCAATTAATTAAATATCAACTTATTTATAACAGA
TAGGTTGCTAGCAACCAGAGACGGTCCTAGAAGGCTTTCGAATAATCACT
CTTGCCTTGGCAATCATTTTCTACGCCGTCCTTTCCTTAAAACAATGGCC
ATGGAGGAAAAAATAATGGAATTCATCGATGAGTTCAATGTCGTACAGAA
CAAGGAGAATATTATAGAAACTTTATATGACATTTTTGGATGTTGATACT
CATATTTTCCAGACCCTGAAATAGAGGAATTGAAATATAGCAATGACTTC
CTCATGAGGAACGATAAAATTATAGCGTCTCCCTTTATTACTAATTCAAT
GTATAAGGGTAGAAGCTATGGAACTCGTTCTCAAACCATTATATTGATCG
ATTATTACGATGAAGTGGGGTACTATGAATCAACAAGGGATTTTAATCCT
CAAACAGAGGAAGAACATTATACTAAAGTGATTAAAGAATTTAAACTATT
ATAG

Add to Basket

Search form